Escherichia coli AVS0967 |
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Putative Escherichia coli AVS0967 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,097,505 bp | CP124398 |
| plasmid pAVS0967-A: | 84,202 bp | CP124399 |
REBASE acronym: EcoS0967
Org_num: 67321
All begin QJB07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15340 | helix-turn-helix domain-containing protein | |||
| 15345 | M | M.Pre393ORF2750P (100% identity) | M.EcoS0967ORF15345P | |
| 15350 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoS0967ORF15345P | |
| 15355 | RecQ family ATP-dependent DNA helicase | |||
| 15360 | DNA-processing protein DprA | |||
| 15365 | R | EcotcmA3ORF16550P (100% identity) | EcoS0967ORF15345P | |
| 15370 | IS3-like element ISSen4 family transposase | |||
| 17370 | endoribonuclease SymE | |||
| 17375 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0967ORF17385P |
| 17380 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0967ORF17385P |
| 17385 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0967ORF17385P |
| 17390 | restriction endonuclease | |||
| 19180 | ash family protein | |||
| 19185 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0967ORF19190P |
| 19190 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0967ORF19190P |
| 19195 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0967ORF19190P |
| 19200 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pAVS0967-A | ||||
| 25210 | IS1-like element IS1B family transposase | |||
| 25215 | S | S.SenBR076ORFFP (46% identity) | S.EcoS0967ORF25220P | |
| 25220 | M | M.SenceORFJP (99% identity) | M.EcoS0967ORF25220P | |
| 25225 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3475 | drug/metabolite exporter YedA | |||
| 3480 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0967DcmP |
| 3485 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0967DcmP |
| 3490 | phosphohydrolase | |||
| 10645 | DNA-binding transcriptional regulator Fis | |||
| 10650 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0967ORF10650P |
| 10655 | DUF2556 family protein | |||
| 11255 | ribulose-phosphate 3-epimerase | |||
| 11260 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0967DamP |
| 11265 | cell division protein DamX | |||
| 12765 | 98 aa hypothetical protein | |||
| 12770 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoS0967ORF12775P |
| 12775 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoS0967ORF12775P |
| 12780 | integrase | |||
| 16020 | conjugal transfer protein TraG N-terminal | |||
| 16025 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS0967ORF16025P | |
| 16030 | R | EcosS3ORF15775P (100% identity) | EcoS0967ORF16025P | |
| 16035 | response regulator receiver domain | |||
| 24670 | TrmB family transcriptional regulator | |||
| 24675 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoS0967ORF24675P |
| 24690 | DUF3927 family protein | |||
| plasmid pAVS0967-A | ||||
| 25150 | 73 aa hypothetical protein | |||
| 25155 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0967ORF25155P |
| 25160 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17385 | class I SAM-dependent DNA methyltransferase | |||
| 17390 | R | Ecou021MrrP (100% identity) | EcoS0967MrrP | |
| 17395 | BrnT family toxin | |||