Escherichia coli AVS0968 |
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Putative Escherichia coli AVS0968 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,919,904 bp | CP124392 |
| plasmid pAVS0968-A: | 135,338 bp | CP124393 |
| plasmid pAVS0968-B: | 114,821 bp | CP124394 |
| plasmid pAVS0968-C: | 90,724 bp | CP124395 |
REBASE acronym: EcoS0968
Org_num: 67322
All begin QJP72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16655 | endoribonuclease SymE | |||
| 16660 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0968ORF16670P |
| 16665 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0968ORF16670P |
| 16670 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0968ORF16670P |
| 16675 | restriction endonuclease | |||
| 18490 | ash family protein | |||
| 18495 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0968ORF18500P |
| 18500 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0968ORF18500P |
| 18505 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0968ORF18500P |
| 18510 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pAVS0968-A | ||||
| 24735 | IS1-like element IS1A family transposase | |||
| 24740 | R | SenceORFJP (51% identity) | CAAYNNNNNCTGG | EcoS0968ORF24760BP |
| 24745 | IS1 family transposase | |||
| 24750 | R | KpnKPH1ORF27575P (48% identity) | CAAYNNNNNCTGG | EcoS0968ORF24760AP |
| 24755 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S1.EcoS0968ORF24760P |
| 24760 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoS0968ORF24760P |
| 24765 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3475 | drug/metabolite exporter YedA | |||
| 3480 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0968DcmP |
| 3485 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0968DcmP |
| 3490 | phosphohydrolase | |||
| 10665 | DNA-binding transcriptional regulator Fis | |||
| 10670 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0968ORF10670P |
| 10675 | DUF2556 family protein | |||
| 11275 | ribulose-phosphate 3-epimerase | |||
| 11280 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0968DamP |
| 11285 | cell division protein DamX | |||
| 21630 | 71 aa hypothetical protein | |||
| 21635 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0968ORF21635P | |
| 21640 | helix-turn-helix transcriptional regulator | |||
| plasmid pAVS0968-A | ||||
| 24675 | 73 aa hypothetical protein | |||
| 24680 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0968ORF24680P |
| 24685 | 103 aa hypothetical protein | |||
| plasmid pAVS0968-C | ||||
| 25600 | 103 aa hypothetical protein | |||
| 25605 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoS0968ORF25605P |
| 25610 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16670 | class I SAM-dependent DNA methyltransferase | |||
| 16675 | R | Ecou021MrrP (100% identity) | EcoS0968MrrP | |
| 16680 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pAVS0968-B | ||||
| 25145 | 269 aa hypothetical protein | |||
| 25150 | M | M.Sso524ORF460P (100% identity) | GATC | M.EcoS0968ORF25150P |
| 25155 | 75 aa hypothetical protein | |||