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Putative Escherichia coli AVS0790 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
Sequence length: | GenBank #: | |
Chromosome: | 5,141,728 bp | CP124436 |
plasmid pAVS0790-A: | 82,979 bp | CP124437 |
REBASE acronym: EcoS0790
Org_num: 67317
All begin QJP66_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18015 | endoribonuclease SymE | |||
18020 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0790ORF18030P |
18025 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0790ORF18030P |
18030 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0790ORF18030P |
18035 | restriction endonuclease | |||
19825 | ash family protein | |||
19830 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0790ORF19835P |
19835 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0790ORF19835P |
19840 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0790ORF19835P |
19845 | type IV toxin-antitoxin system AbiEi family | |||
plasmid pAVS0790-A | ||||
25695 | IS1-like element IS1A family transposase | |||
25700 | R | KpnKPH1ORF27575P (82% identity) | CAAYNNNNNCTGG | EcoS0790ORF25710P |
25705 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoS0790ORF25710P |
25710 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoS0790ORF25710P |
25715 | type II toxin-antitoxin system Phd/YefM family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3810 | drug/metabolite exporter YedA | |||
3815 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0790DcmP |
3820 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0790DcmP |
3825 | phosphohydrolase | |||
11580 | DNA-binding transcriptional regulator Fis | |||
11585 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0790ORF11585P |
11590 | DUF2556 family protein | |||
12190 | ribulose-phosphate 3-epimerase | |||
12195 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0790DamP |
12200 | cell division protein DamX | |||
15815 | PerC family transcriptional regulator | |||
15820 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoS0790ORF15820P |
15825 | LexA family transcriptional regulator | |||
17660 | helix-turn-helix domain-containing protein | |||
17665 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0790ORF17665P |
17670 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0790ORF17665P |
17675 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0790ORF17665P |
17680 | McrC family protein | |||
23065 | 71 aa hypothetical protein | |||
23070 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0790ORF23070P | |
23075 | helix-turn-helix transcriptional regulator | |||
plasmid pAVS0790-A | ||||
25635 | 73 aa hypothetical protein | |||
25640 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0790ORF25640P |
25645 | 103 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17675 | Alw26I/Eco31I/Esp3I family type II restriction | |||
17680 | R | EcosS9McrCP (100% identity) | EcoS0790McrCP | |
17685 | R | EcosS3McrBP (100% identity) | EcoS0790McrBP | |
17690 | glycosyltransferase | |||
18030 | class I SAM-dependent DNA methyltransferase | |||
18035 | R | Ecou021MrrP (100% identity) | EcoS0790MrrP | |
18040 | BrnT family toxin |