Halotia branconii CENA392 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Halotia branconii CENA392 RM systems
Ref: Dextro,R.B. et al. Limnol Oceanogr Lett (2023) In press
REBASE ref # 36785
| Sequence length: | GenBank #: | |
| Chromosome: | 6,866,024 bp | CP124543 |
| plasmid unnamed1: | 250,409 bp | CP124544 |
REBASE acronym: Hbr392
Org_num: 67425
All begin QI031_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13300 | Uma2 family endonuclease | |||
| 13305 | M | M.AspWA102II (48% identity) | M.Hbr392ORF13305BP | |
| 13310 | IS5 family transposase | |||
| 13315 | M | M.AspWA102II (29% identity) | M.Hbr392ORF13305AP | |
| 13320 | Uma2 family endonuclease | |||
| 13325 | S | S.BbaC05ORFBP (18% identity) | S.Hbr392ORF13305P | |
| 13330 | type II toxin-antitoxin system VapC family | |||
| 13335 | 76 aa hypothetical protein | |||
| 13340 | R | Gsp3708ORF3309P (52% identity) | Hbr392ORF13305P | |
| 13345 | sugar ABC transporter permease | |||
| 16800 | 144 aa hypothetical protein | |||
| 16805 | M | M.Nsp7107ORF4406P (59% identity) | M.Hbr392ORF16805P | |
| 16810 | 56 aa hypothetical protein | |||
| 18190 | 80 aa hypothetical protein | |||
| 18195 | S | M.Nsp870ORF21720P (55% identity) | S.Hbr392ORF18200P | |
| 18200 | M | M.Nsp870ORF21720P (35% identity) | M.Hbr392ORF18200P | |
| 18205 | 41 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 475 | DGQHR domain-containing protein | |||
| 480 | M | M.Nsp926DndCP (85% identity) | M.Hbr392DndCP | |
| 485 | helix-turn-helix transcriptional regulator | |||
| 490 | 84 aa hypothetical protein | |||
| 495 | M | M.CovDndDP (80% identity) | M.Hbr392DndDP | |
| 500 | 83 aa hypothetical protein | |||
| 505 | type II toxin-antitoxin system PemK/MazF family | |||
| 510 | M | M.Tva0441DndEP (90% identity) | M.Hbr392DndEP | |
| 515 | DNA phosphorothioation-associated putative | |||
| 2165 | methionyl-tRNA formyltransferase | |||
| 2170 | M | M.Nsp0302ORF27570P (82% identity) | M.Hbr392ORF2170P | |
| 2175 | response regulator | |||
| 4110 | dienelactone hydrolase family protein | |||
| 4115 | M | M.Csp7507ORF696P (82% identity) | M.Hbr392ORF4115P | |
| 4120 | 142 aa hypothetical protein | |||
| 6235 | acetyl-CoA carboxylase biotin carboxylase | |||
| 6240 | M | M.TspTB121ORFIP (87% identity) | M.Hbr392ORF6240P | |
| 6245 | R | DspB1220ORF16085P (91% identity) | Hbr392ORF6240P | |
| 6250 | YggT family protein | |||
| 7935 | alpha-amylase family protein | |||
| 7940 | R | Npi21ORF11410P (86% identity) | Hbr392ORF7945P | |
| 7945 | M | M.Tte7101ORF29540P (84% identity) | M.Hbr392ORF7945P | |
| 7950 | helix-turn-helix domain-containing protein | |||
| 8900 | urea ABC transporter ATP-binding subunit UrtE | |||
| 8905 | R | Nsp5183ORF5964P (90% identity) | Hbr392ORF8910P | |
| 8910 | M | M.Nsp5183ORF5964P (86% identity) | M.Hbr392ORF8910P | |
| 8915 | urea ABC transporter ATP-binding protein UrtD | |||
| 15065 | alanine--glyoxylate aminotransferase family | |||
| 15070 | M | M.Nsp926ORF20985P (74% identity) | M.Hbr392ORF15070P | |
| 15075 | Gldg family protein | |||
| 16385 | DNA-3-methyladenine glycosylase | |||
| 16390 | M | M.Fsp4106ORF14840P (80% identity) | M.Hbr392ORF16390P | |
| 16395 | 219 aa hypothetical protein | |||
| 17480 | 160 aa hypothetical protein | |||
| 17485 | M | M.Nsp24002ORF9465P (77% identity) | M.Hbr392ORF17485P | |
| 17490 | DUF751 family protein | |||
| 18155 | 70 aa hypothetical protein | |||
| 18160 | M | M.NcoHK02ORF39950P (85% identity) | M.Hbr392ORF18160P | |
| 18165 | ferredoxin:protochlorophyllide reductase | |||
| 22500 | excinuclease ABC subunit UvrC | |||
| 22505 | M | M.Nsp9414ORF51370P (41% identity) | M.Hbr392ORF22505P | |
| 22510 | replication restart DNA helicase PriA | |||
| 24715 | 48 aa hypothetical protein | |||
| 24720 | RM | Nsp210ORF9385P (75% identity) | Hbr392ORF24720P | |
| 24725 | 40 aa hypothetical protein | |||
| 24810 | 62 aa hypothetical protein | |||
| 24815 | M | M.Csp4074ORF49700P (76% identity) | M.Hbr392ORF24815P | |
| 24820 | deoxyribose-phosphate aldolase | |||
| plasmid unnamed1 | ||||
| 30410 | DUF1392 family protein | |||
| 30415 | M | M.NspC057ORF40145P (76% identity) | M.Hbr392ORF30415P | |
| 30420 | ASCH domain-containing protein | |||
| 30470 | cytosolic protein | |||
| 30475 | M | M.Nsp2111ORF64210P (82% identity) | M.Hbr392ORF30475P | |
| 30480 | 68 aa hypothetical protein | |||