Escherichia coli GYX208DH4E-2 |
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Putative Escherichia coli GYX208DH4E-2 RM systems
Ref: He,W. et al. unpublished
REBASE ref # 36683
| Sequence length: | GenBank #: | |
| Chromosome: | 4,853,846 bp | CP104851 |
| plasmid pHN4E2-NDM5: | 99,713 bp | CP104852 |
REBASE acronym: EcoH4E2
Org_num: 67028
All begin N6H16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14155 | transcription factor | |||
| 14160 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoH4E2ORF14160P |
| 14165 | S | S.Ecos2020ORFCP (100% identity) | YTCANNNNNNGTTY | S.EcoH4E2ORF14160P |
| 14170 | DUF4433 domain-containing protein | |||
| 14175 | macro domain-containing protein | |||
| 14180 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | EcoH4E2ORF14160P |
| 14185 | M48 family metallopeptidase | |||
| plasmid pHN4E2-NDM5 | ||||
| 23940 | IS1 family transposase | |||
| 23945 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNNCTGG | EcoH4E2ORF23955P |
| 23950 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoH4E2ORF23955P |
| 23955 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.EcoH4E2ORF23955P |
| 23960 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1955 | cell division protein DamX | |||
| 1960 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoH4E2DamP |
| 1965 | ribulose-phosphate 3-epimerase | |||
| 2580 | DUF2556 family protein | |||
| 2585 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoH4E2ORF2585P |
| 2590 | DNA-binding transcriptional regulator Fis | |||
| 9430 | phosphohydrolase | |||
| 9435 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoH4E2DcmP |
| 9440 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoH4E2DcmP |
| 9445 | drug/metabolite exporter YedA | |||
| 22260 | 341 aa hypothetical protein | |||
| 22265 | M | M.EcosE2ORF21575P (100% identity) | GGCC | M.EcoH4E2ORF22265P |
| 22270 | 68 aa hypothetical protein | |||
| plasmid pHN4E2-NDM5 | ||||
| 23845 | 73 aa hypothetical protein | |||
| 23850 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoH4E2ORF23850P |
| 23855 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13470 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13475 | R | EmaE2C08McrCP (100% identity) | EcoH4E2McrCP | |
| 13480 | R | EcoteDMcrBP (100% identity) | EcoH4E2McrBP | |
| 13485 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15360 | replication endonuclease | |||
| 15365 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoH4E2ORF15365P |
| 15370 | TraR/DksA family transcriptional regulator | |||