Helicobacter species NHP21005 NHP21-005 |
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Putative Helicobacter species NHP21005 NHP21-005 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 36568
| Sequence length: | GenBank #: | |
| Chromosome: | 1,737,144 bp | AP028022 |
| plasmid pNHP21005_2: | 24,904 bp | AP028024 |
REBASE acronym: Hsp21005
Org_num: 66630
All begin NHP21005_, NHP21005_r, NHP21005_tm
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9370 | HicB-like domain-containing protein | |||
| 9380 | S | S.Hsp5293ORF10015P (47% identity) | S2.Hsp21005ORF9420P | |
| 9390 | R | HbiCORF350P (58% identity) | Hsp21005ORF9420P | |
| 9400 | S | S2.Fpr3ORF30950P (19% identity) | S1.Hsp21005ORF9420P | |
| 9410 | 257 aa hypothetical protein | |||
| 9420 | M | M.HbiCORF380P (69% identity) | M.Hsp21005ORF9420P | |
| 9430 | 66 aa hypothetical protein | |||
| 9920 | 84 aa hypothetical protein | |||
| ??? | R | HfeORF15930P (80% identity) | Hsp21005ORF9970P | |
| 9950 | S | S.HaiASB7ORF6350P (55% identity) | S2.Hsp21005ORF9970P | |
| 9960 | S | S2.MauBONORF2546P (20% identity) | S1.Hsp21005ORF9970P | |
| ??? | M | M.HaiASB7ORF4510P (84% identity) | M.Hsp21005ORF9970P | |
| 9990 | 45 aa hypothetical protein | |||
| 10440 | 55 aa hypothetical protein | |||
| 10450 | S | S.HpyML2ORFMP (62% identity) | S.Hsp21005ORF10460P | |
| 10460 | M | M.HpySP110ORF2320P (56% identity) | M.Hsp21005ORF10460P | |
| ??? | R | HpyU102ORF2135P (32% identity) | Hsp21005ORF10460P | |
| 10490 | 74 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 500 | 80 aa hypothetical protein | |||
| 510 | M | M.Hsp0003ORF470P (84% identity) | M.Hsp21005ORF510P | |
| 520 | Shikimate 5-dehydrogenase | |||
| 1860 | 128 aa hypothetical protein | |||
| 1870 | RM | Hsp0003ORF4950P (66% identity) | Hsp21005ORF1870P | |
| 1880 | 50 aa hypothetical protein | |||
| 11250 | 565 aa hypothetical protein | |||
| ??? | M | M.Hsp21005ORF16020P (71% identity) | M.Hsp21005ORF11260P | |
| 10 | 499 aa hypothetical protein | |||
| 11290 | 122 aa hypothetical protein | |||
| ??? | RM | HfeORF12890P (59% identity) | Hsp21005ORF11300P | |
| 11330 | Quinone-reactive Ni/Fe hydrogenase HydA | |||
| 12630 | Molybdenum cofactor biosynthesis protein A MoaA | |||
| 12640 | M | M.Hsp0003ORF8710P (72% identity) | M.Hsp21005ORF12640P | |
| 12660 | Type II restriction enzyme | |||
| 12650 | 72 aa hypothetical protein | |||
| 12660 | R | Hsp0012ORF10580P (87% identity) | Hsp21005ORF12670P | |
| 12670 | M | M.Hsp0003ORF8740P (90% identity) | M.Hsp21005ORF12670P | |
| 12680 | 73 aa hypothetical protein | |||
| 14840 | Saccharopine dehydrogenase | |||
| ??? | M | M.Hsp0003ORF5180P (85% identity) | M.Hsp21005ORF14850P | |
| 14870 | 660 aa hypothetical protein | |||
| 16010 | Hemolysin Tly | |||
| ??? | M | M.Hsp0003ORF12800P (80% identity) | M.Hsp21005ORF16020P | |
| 16040 | 54 aa hypothetical protein | |||
| 18580 | Histidyl-tRNA synthetase HisS | |||
| ??? | M | M.Hsp0003ORF15120P (77% identity) | M.Hsp21005ORF18590P | |
| 10 | pseudogene | |||
| plasmid pNHP21005_2 | ||||
| 19750 | 864 aa hypothetical protein | |||
| 19760 | M | M.HbiCORF700P (93% identity) | M.Hsp21005ORF19760P | |
| 19770 | R | HbiCORF700P (86% identity) | Hsp21005ORF19760P | |
| 19780 | HipA domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13800 | 95 aa hypothetical protein | |||
| 13810 | R | HbiCORF1950P (17% identity) | Hsp21005ORF13820P | |
| ??? | M | M.Csp25113ORF1146P (22% identity) | M.Hsp21005ORF13820P | |
| 13840 | Carbamoyl phosphate synthase large subunit CarB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10290 | 120 aa hypothetical protein | |||
| 10300 | R | Hsp6242McrBP (24% identity) | Hsp21005McrB2P | |
| 10310 | R | HbiCMcrC2P (69% identity) | Hsp21005McrC2P | |
| 10320 | 125 aa hypothetical protein | |||