Propionibacterium freudenreichii FAM19024 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Propionibacterium freudenreichii FAM19024 RM systems
Ref: Roder,T. et al. unpublished
REBASE ref # 36611
Complete sequence: 2,702,819 bp
GenBank #: CP120878
REBASE acronym: Pfr19024
Org_num: 66769
All begin FAM19024_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 208 | 3-5 exonuclease | |||
| 209 | R | PfrJS13aIIP (87% identity) | Pfr19024ORF213P | |
| 210 | ISL3-like element ISPfr1 family transposase | |||
| 211 | S | S.PfrJS7aIII (40% identity) | S.Pfr19024ORF213P | |
| 212 | IS30 family transposase | |||
| 213 | M | M.PfrUF1ORF10885P (31% identity) | M.Pfr19024ORF213P | |
| 214 | ABC transporter ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 62 | 195 aa hypothetical protein | |||
| ??? | M | M.PfrJS2V (99% identity) | GCCGGC | M.Pfr19024ORF63P |
| 64 | DNA-processing protein DprA | |||
| 352 | 67 aa hypothetical protein | |||
| 353 | M | M.PfrP18ORF10145P (98% identity) | M.Pfr19024ORF353P | |
| 354 | R | PfrP18ORF10145P (96% identity) | Pfr19024ORF353P | |
| 355 | V | V.PfrP18ORF10145P (95% identity) | V.Pfr19024ORF353P | |
| 356 | 264 aa hypothetical protein | |||
| 411 | 94 aa hypothetical protein | |||
| 412 | RM | PfrIH19ORFGP (97% identity) | Pfr19024ORF412P | |
| 413 | IS3 family transposase | |||
| 1815 | relaxase domain-containing protein | |||
| 1816 | M | M.PfrPBF01ORFGP (96% identity) | M.Pfr19024ORF1816P | |
| 1817 | DUF262 domain-containing protein | |||
| 1817 | DUF262 domain-containing protein | |||
| 1818 | RM | Msp7ORF11960P (84% identity) | Pfr19024ORF1818P | |
| 1819 | 88 aa hypothetical protein | |||
| 2405 | 413 aa hypothetical protein | |||
| 2406 | M | M.Mpl2ORF14965P (64% identity) | M.Pfr19024ORF2406P | |
| 2407 | 166 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1708 | IS30 family transposase | |||
| 1709 | R | PfrP14ORF2140P (99% identity) | Pfr19024ORF1710P | |
| 1710 | M | M.PfrP14ORF2140P (99% identity) | M.Pfr19024ORF1710P | |
| 1711 | redox-regulated ATPase YchF | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 386 | MATE family efflux transporter | |||
| 387 | R | PfrTL29Mrr3P (100% identity) | Pfr19024MrrP | |
| 388 | kinase/pyrophosphorylase | |||
| 427 | ISL3-like element ISPfr1 family transposase | |||
| 428 | R | PfrPBF15ORFEP (88% identity) | Pfr19024ORF428P | |
| 429 | anaerobic C4-dicarboxylate transporter | |||