Escherichia coli RHB28-SO-C01 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB28-SO-C01 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,480,836 bp | CP099147 |
| plasmid unnamed2: | 44,007 bp | CP099149 |
REBASE acronym: Eco28SOC01
Org_num: 66479
All begin NFK36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5250 | GTPase family protein | |||
| 5255 | M | M.EcoNT1F25ORFBP (93% identity) | M.Eco28SOC01ORF5255P | |
| 5260 | S | S.Eco41C07ORF5215P (100% identity) | S.Eco28SOC01ORF5255P | |
| 5265 | R | Eco819ORF3430P (100% identity) | Eco28SOC01ORF5255P | |
| 5270 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco28SOC01DamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 family protein | |||
| 2325 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco28SOC01ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 8765 | phosphohydrolase | |||
| 8770 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco28SOC01DcmP |
| 8775 | V | V.SflSTLE1DcmP (100% identity) | V.Eco28SOC01DcmP | |
| 8780 | drug/metabolite exporter YedA | |||
| plasmid unnamed2 | ||||
| 22045 | IS1 family transposase | |||
| 22050 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco28SOC01ORF22050P |
| 22055 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | R1.Eco28SOC01ORF22050P |
| 22060 | IS1380-like element ISEcp1 family transposase | |||
| 22065 | IS5-like element ISKpn26 family transposase | |||
| 22070 | extended-spectrum class A beta-lactamase | |||
| 22075 | WbuC family cupin fold metalloprotein | |||
| 22080 | R | Ssp3CORF24390P (49% identity) | R2.Eco28SOC01ORF22050P | |
| 22085 | recombinase family protein | |||