Escherichia coli RHB47-SO-C08 |
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Putative Escherichia coli RHB47-SO-C08 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 5,310,763 bp | CP098927 |
| plasmid unnamed1: | 96,382 bp | CP098928 |
REBASE acronym: Eco47SOC08
Org_num: 66549
All begin NFL66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2690 | endoribonuclease SymE | |||
| 2695 | S | S.Kox5034ORF5995P (88% identity) | S.Eco47SOC08ORF2700P | |
| 2700 | M | M.Eco4221ORFCP (99% identity) | M.Eco47SOC08ORF2700P | |
| 2705 | R | Eco266ORF19185P (99% identity) | Eco47SOC08ORF2700P | |
| 2710 | adenine/cytosine-specific restriction | |||
| 7960 | 122 aa hypothetical protein | |||
| 7965 | R | Eco0410ORF9850P (99% identity) | Eco47SOC08ORF7975P | |
| 7970 | S | S.EcoL621ORF23115P (99% identity) | S.Eco47SOC08ORF7975P | |
| 7975 | M | M.EcoPI24ORF3560P (100% identity) | M.Eco47SOC08ORF7975P | |
| 7980 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2470 | IS21-like element IS100 family transposase | |||
| 2475 | R | EcotcmA3ORF9780P (70% identity) | Eco47SOC08ORF2475P | |
| 2480 | HNH endonuclease | |||
| 2905 | PerC family transcriptional regulator | |||
| 2910 | M | M.EcosA32ORF3630P (100% identity) | GATC | M.Eco47SOC08ORF2910P |
| 2915 | RusA family crossover junction | |||
| 8590 | TrmB family transcriptional regulator | |||
| 8595 | M | M.Eco47SOC08ORF17420P (97% identity) | M.Eco47SOC08ORF8595P | |
| 8610 | phage holin family protein | |||
| 13660 | drug/metabolite exporter YedA | |||
| 13665 | V | V.EcoC165DcmP (100% identity) | V.Eco47SOC08DcmP | |
| 13670 | M | M.EcoC165DcmP (99% identity) | CCWGG | M.Eco47SOC08DcmP |
| 13675 | phosphohydrolase | |||
| 17415 | phage holin family protein | |||
| 17420 | M | M.Eco47SOC08ORF8595P (97% identity) | M.Eco47SOC08ORF17420P | |
| 17425 | TrmB family transcriptional regulator | |||
| 22275 | ribulose-phosphate 3-epimerase | |||
| 22280 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco47SOC08DamP |
| 22285 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 25545 | 101 aa hypothetical protein | |||
| 25550 | M | M.Kpn1026ORFJP (100% identity) | M.Eco47SOC08ORF25550P | |
| 25555 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2680 | R | Efe38C01McrCP (100% identity) | Eco47SOC08McrCP | |
| 2685 | R | Efe5McrBP (98% identity) | Eco47SOC08McrBP | |
| 2690 | endoribonuclease SymE | |||
| 2705 | type I restriction-modification system | |||
| 2710 | R | Ssp28760MrrP (100% identity) | Eco47SOC08MrrP | |
| 2715 | GTPase | |||