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Putative Escherichia coli RHB46-C23 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Sequence length: | GenBank #: | |
Chromosome: | 4,788,431 bp | CP098965 |
plasmid unnamed1: | 164,819 bp | CP098966 |
REBASE acronym: Eco46C23
Org_num: 66541
All begin NFL53_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3410 | transposase domain-containing protein | |||
3415 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco46C23ORF3415P |
3420 | AAA family ATPase | |||
3425 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco46C23ORF3415P |
3430 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco46C23ORF3415P |
3435 | IS3 family transposase | |||
plasmid unnamed1 | ||||
23260 | M48 family metallopeptidase | |||
23265 | R | Eco44C14ORF23150P (100% identity) | GATGNNNNNCTG | Eco46C23ORF23275P |
23270 | S | S.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | S.Eco46C23ORF23275P |
23275 | M | M.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | M.Eco46C23ORF23275P |
23280 | IS3 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1710 | cell division protein DamX | |||
1715 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco46C23DamP |
1720 | ribulose-phosphate 3-epimerase | |||
2265 | DUF2556 family protein | |||
2270 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco46C23ORF2270P |
2275 | DNA-binding transcriptional regulator Fis | |||
9690 | DUF977 family protein | |||
9695 | M | M.Eco44C14ORF10020P (99% identity) | M.Eco46C23ORF9695P | |
9700 | 155 aa hypothetical protein | |||
15170 | 70 aa hypothetical protein | |||
15175 | M | M.EclZ1LORF11920P (100% identity) | M.Eco46C23ORF15175P | |
15180 | DUF3850 domain-containing protein | |||
17925 | phage terminase large subunit | |||
17930 | M | M.Eal22ORF9305P (99% identity) | M.Eco46C23ORF17930P | |
17935 | DUF1804 family protein | |||
20180 | HNH endonuclease | |||
20185 | R | EcoSTEC384ORFHP (96% identity) | Eco46C23ORF20185P | |
20190 | peptidase | |||
20190 | peptidase | |||
20195 | M | M.EcoXH993ORF23960P (100% identity) | RCCGGY | M.Eco46C23ORF20195P |
20200 | R | R2.EcoXH993ORF23960P (100% identity) | RCCGGY | Eco46C23ORF20195P |
20205 | integrase core domain-containing protein | |||
plasmid unnamed1 | ||||
23960 | recombination protein NinB | |||
23965 | M | M.Eco44C14ORF23840P (100% identity) | GATC | M.Eco46C23ORF23965P |
23970 | NinE family protein |