Escherichia coli RHB45-SO-C06 |
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Putative Escherichia coli RHB45-SO-C06 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 5,011,531 bp | CP099005 |
| plasmid unnamed1: | 103,647 bp | CP099006 |
REBASE acronym: Eco45S0C06
Org_num: 66525
All begin NFL38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6575 | IS1 family transposase | |||
| 6580 | R | Ror24150ORF17255P (100% identity) | GGANNNNNCTC | Eco45S0C06ORF6590P |
| 6585 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Eco45S0C06ORF6590P |
| 6590 | M | M.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | M.Eco45S0C06ORF6590P |
| 6595 | IS3 family transposase | |||
| 21475 | DUF4942 domain-containing protein | |||
| 21480 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.Eco45S0C06ORF21480P |
| 21485 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.Eco45S0C06ORF21480P |
| 21490 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | Eco45S0C06ORF21480P |
| 21500 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2330 | cell division protein DamX | |||
| 2335 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco45S0C06DamP |
| 2340 | ribulose-phosphate 3-epimerase | |||
| 2885 | DUF2556 family protein | |||
| 2890 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco45S0C06ORF2890P |
| 2895 | DNA-binding transcriptional regulator Fis | |||
| 4700 | 178 aa hypothetical protein | |||
| 4705 | M | M.Eco33C12ORF18515P (100% identity) | M.Eco45S0C06ORF4705P | |
| 4710 | ATP-binding protein | |||
| 7215 | DUF1382 family protein | |||
| 7220 | M | M.EcosE1ORFEP (100% identity) | GATC | M.Eco45S0C06ORF7220P |
| 7225 | PerC family transcriptional regulator | |||
| 12205 | DUF977 family protein | |||
| 12210 | M | M.EcosC41ORF15185P (100% identity) | M.Eco45S0C06ORF12210P | |
| 12215 | 139 aa hypothetical protein | |||
| 14050 | phage holin family protein | |||
| 14065 | M | M.Eco06C20ORF13280P (100% identity) | M.Eco45S0C06ORF14065P | |
| 14070 | TrmB family transcriptional regulator | |||
| 15620 | 92 aa hypothetical protein | |||
| 15625 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco45S0C06ORF15625P | |
| 15630 | TrmB family transcriptional regulator | |||
| 16510 | replication endonuclease | |||
| 16515 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco45S0C06ORF16515P |
| 16520 | TraR/DksA family transcriptional regulator | |||
| 19320 | 158 aa hypothetical protein | |||
| 19325 | R | Sso8033ORF3755P (100% identity) | CCWGG | Eco45S0C06ORF19330P |
| 19330 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco45S0C06ORF19330P |
| 19335 | 257 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 24730 | 103 aa hypothetical protein | |||
| 24735 | M | M.Eco19C13ORF24960P (100% identity) | M.Eco45S0C06ORF24735P | |
| 24740 | 73 aa hypothetical protein | |||