Escherichia coli RHB13-SO-C01 |
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Putative Escherichia coli RHB13-SO-C01 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,860,370 bp | CP099237 |
| plasmid unnamed2: | 95,217 bp | CP099239 |
| plasmid unnamed3: | 91,303 bp | CP099240 |
REBASE acronym: Eco13SOC01
Org_num: 66450
All begin NFJ73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10825 | NADPH-dependent aldehyde reductase Ahr | |||
| 10835 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco13SOC01ORF10845P |
| 10840 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco13SOC01ORF10845P |
| 10845 | M | M.Eco13SOC03ORF10840P (100% identity) | RTCANNNNNNCTC | M.Eco13SOC01ORF10845P |
| 10850 | restriction endonuclease subunit M | |||
| 18530 | IS5-like element ISKpn26 family transposase | |||
| 18535 | R | Eco13SOC03ORF18540P (100% identity) | Eco13SOC01ORF18545P | |
| 18540 | S | S.SflN97ORF14060P (100% identity) | S.Eco13SOC01ORF18545P | |
| 18545 | M | M.SflN97ORF14060P (100% identity) | M.Eco13SOC01ORF18545P | |
| 18550 | GTPase family protein | |||
| plasmid unnamed2 | ||||
| 24535 | type II toxin-antitoxin system Phd/YefM family | |||
| 24540 | M | M.EcoS321ORF25465P (100% identity) | GAANNNNNNNRTCG | M.Eco13SOC01ORF24540P |
| 24545 | S | S.EcoMB50ORF22700P (100% identity) | GAANNNNNNNRTCG | S.Eco13SOC01ORF24540P |
| 24550 | R | EcoS321ORF25465P (100% identity) | GAANNNNNNNRTCG | Eco13SOC01ORF24540P |
| 24555 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 735 | phosphohydrolase | |||
| 740 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco13SOC01DcmP |
| 745 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco13SOC01DcmP |
| 750 | drug/metabolite exporter YedA | |||
| 5575 | phage lysis protein EssD | |||
| 5580 | M | M.Sso63633ORF22290P (100% identity) | M.Eco13SOC01ORF5580P | |
| 5585 | 67 aa hypothetical protein | |||
| 5615 | LexA family transcriptional regulator | |||
| 5620 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco13SOC01ORF5620P |
| 5625 | PerC family transcriptional regulator | |||
| 8790 | NinE family protein | |||
| 8795 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco13SOC01ORF8795P |
| 8800 | recombination protein NinB | |||
| 8895 | DUF1317 domain-containing protein | |||
| 8900 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco13SOC01ORF8900P |
| 8905 | cell division protein ZapA | |||
| 10865 | McrC family protein | |||
| 10870 | R | EcoWCTORF19980P (100% identity) | Eco13SOC01ORF10870P | |
| 10875 | HNH endonuclease | |||
| 17395 | DUF2556 family protein | |||
| 17400 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco13SOC01ORF17400P |
| 17405 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed2 | ||||
| 24645 | SPFH domain-containing protein | |||
| 24660 | M | M.Sen9860ORF25540P (100% identity) | M.Eco13SOC01ORF24660P | |
| 24665 | recombination-associated protein RdgC | |||
| plasmid unnamed3 | ||||
| 24805 | 103 aa hypothetical protein | |||
| 24810 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco13SOC01ORF24810P |
| 24815 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10855 | IS3-like element IS3 family transposase | |||
| 10860 | R | SflSTLE4McrBP (100% identity) | Eco13SOC01McrBP | |
| 10865 | R | EcoZ151McrCP (100% identity) | Eco13SOC01McrCP | |
| 10870 | HNH endonuclease | |||