Escherichia coli RHB08-SO-C08 |
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Putative Escherichia coli RHB08-SO-C08 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,863,177 bp | CP099255 |
| plasmid unnamed1: | 101,114 bp | CP099256 |
REBASE acronym: Eco8SOC08
Org_num: 66446
All begin NFJ56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11200 | adenine/cytosine-specific restriction | |||
| 11205 | R | Eco4BL08ORF39860P (100% identity) | Eco8SOC08ORF11210P | |
| 11210 | M | M.EcoES5ORF3915P (99% identity) | M.Eco8SOC08ORF11210P | |
| 11215 | S | S.EcoDI (70% identity) | S.Eco8SOC08ORF11210P | |
| 11220 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 720 | phosphohydrolase | |||
| 725 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco8SOC08DcmP |
| 730 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco8SOC08DcmP |
| 735 | drug/metabolite exporter YedA | |||
| 11425 | HNH endonuclease | |||
| 11430 | R | SdySWHE2ORF4090P (100% identity) | Eco8SOC08ORF11430P | |
| 11435 | peptidase | |||
| 16860 | DUF2556 family protein | |||
| 16865 | M | M.Ecou015ORF2460P (100% identity) | ATGCAT | M.Eco8SOC08ORF16865P |
| 16870 | DNA-binding transcriptional regulator Fis | |||
| 20055 | adhesin-like autotransporter YpjA/EhaD | |||
| 20060 | R | Sens24184ORF5380P (100% identity) | C | Eco8SOC08ORF20060P |
| 20065 | primase-like DNA-binding domain-containing | |||
| plasmid unnamed1 | ||||
| 23280 | 73 aa hypothetical protein | |||
| 23285 | M | M.SflN92ORF24820P (100% identity) | M.Eco8SOC08ORF23285P | |
| 23290 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4785 | isocitrate/isopropylmalate family dehydrogenase | |||
| 4790 | R | EcoSW4848GmrSD2P (100% identity) | Eco8SOC08GmrSDP | |
| 4795 | recombinase family protein | |||
| 11195 | GTPase | |||
| 11200 | R | Ssp28760MrrP (100% identity) | Eco8SOC08MrrP | |
| 11205 | type I restriction-modification system | |||
| 11220 | endoribonuclease SymE | |||
| 11225 | R | Eco10C12McrBP (98% identity) | Eco8SOC08McrBP | |
| 11230 | R | Eco502CCMcrCP (97% identity) | Eco8SOC08McrCP | |