Yersinia pestis Nepal516 |
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Putative Yersinia pestis Nepal516 RM systems
Ref: Chain,P.S. et al. J. Bacteriol. 188 (12), 4453-4463 (2006)
REBASE ref # 9514
| Sequence length: | GenBank #: | |
| Chromosome: | 4,534,590 bp | CP000305 (NC_008149) |
| plasmid pMT: | 100,918 bp | CP000306 (NC_008118) |
REBASE acronym: YpeN
Org_num: 4453
All begin YPN_, YPN_MT
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 261 | 155 aa hypothetical protein | |||
| 262 | M | M.YpeZORF386P (100% identity) | CCWGG | M.YpeNORF262P |
| 263 | 240 aa hypothetical protein | |||
| 1562 | insertion sequence IS100, ATP-binding protein | |||
| 1563 | M | methyltransferase | TGGCCA | M.YpeNORF1563P |
| 1564 | 148 aa hypothetical protein | |||
| 3910 | ribulose-5-phosphate 3-epimerase | |||
| 3911 | M | M.Ysi228DamP (100% identity) | GATC | M.YpeNDamP |
| 3912 | 329 aa conserved hypothetical membrane protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 257 | transposase for insertion sequence IS100 | |||
| 258 | R | YpeZMcrBP (100% identity) | YpeNMcrBP | |
| 259 | R | YpeZMcrCP (100% identity) | YpeNMcrCP | |
| 260 | 76 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMT | ||||
| 104 | 102 aa hypothetical protein | |||
| 88 | M | M.YpeZORF72P (100% identity) | M.YpeNORF88P | |
| 89 | 73 aa hypothetical protein | |||