Escherichia fergusonii RHB44-C21 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia fergusonii RHB44-C21 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,614,228 bp | CP099328 |
| plasmid unnamed1: | 112,169 bp | CP099329 |
| plasmid unnamed2: | 87,952 bp | CP099330 |
REBASE acronym: Efe44C21
Org_num: 66608
All begin NFL02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18480 | Fic family protein | |||
| 18485 | R | Eco266ORF19185P (99% identity) | Efe44C21ORF18490P | |
| 18490 | M | M.Eco1334ORF11310P (100% identity) | M.Efe44C21ORF18490P | |
| 18495 | S | S.Yru74ORF12275P (51% identity) | S.Efe44C21ORF18490P | |
| 18500 | endoribonuclease SymE | |||
| 18590 | 428 aa hypothetical protein | |||
| 18595 | S | S.EfeII (100% identity) | CRAANNNNNRTGG | S.Efe44C21ORF18600P |
| 18600 | M | M.EfeII (100% identity) | CRAANNNNNRTGG | M.Efe44C21ORF18600P |
| 18605 | 128 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 22610 | 3-phosphatase | |||
| 22630 | type II toxin-antitoxin system Phd/YefM family | |||
| 22615 | R | EcoMB30ORF24755P (100% identity) | Efe44C21ORF22625P | |
| 22620 | S | S.EcoMB30ORF24755P (100% identity) | S1.Efe44C21ORF22625P | |
| 22625 | M | M.Sen332CCORF25080P (100% identity) | M.Efe44C21ORF22625P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1315 | bifunctional isocitrate dehydrogenase | |||
| 1320 | M | M.EfeTORF2210P (100% identity) | CCWGG | M.Efe44C21ORF1320P |
| 1325 | glyoxylate bypass operon transcriptional | |||
| 3040 | 28 aa hypothetical protein | |||
| 3045 | M | M.Sen24770ORF310P (100% identity) | GATC | M.Efe44C21ORF3045P |
| 3050 | RusA family crossover junction | |||
| 7870 | TraR/DksA family transcriptional regulator | |||
| 7875 | M | M.EcoF637ORF29230P (99% identity) | GATC | M.Efe44C21ORF7875P |
| 7880 | replication endonuclease | |||
| 17505 | RM | EcoRC2ORF970008P (99% identity) | Efe44C21ORF17505P | |
| 17510 | DEAD/DEAH box helicase | |||
| 18615 | AAA family ATPase | |||
| 18620 | R | Efe1499ORF20650P (97% identity) | Efe44C21ORF18620P | |
| 18625 | McrC family protein | |||
| 19795 | ribulose-phosphate 3-epimerase | |||
| 19800 | M | M.EfeTDamP (100% identity) | GATC | M.Efe44C21DamP |
| 19805 | cell division protein DamX | |||
| plasmid unnamed2 | ||||
| 22995 | glutamine--tRNA ligase | |||
| 23000 | M | M.Efe5ORFAP (67% identity) | M.Efe44C21ORF23000P | |
| 23005 | 206 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18500 | endoribonuclease SymE | |||
| 18505 | R | Efe35470McrBP (98% identity) | Efe44C21McrB2P | |
| 18510 | R | EfeMcrCP (100% identity) | Efe44C21McrC2P | |
| 18605 | 128 aa hypothetical protein | |||
| 18610 | R | EfeMcrC2P (99% identity) | Efe44C21McrCP | |
| 18615 | R | EfeMcrB2P (99% identity) | Efe44C21McrBP | |
| 18620 | HNH endonuclease | |||