Escherichia coli DY612 |
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Putative Escherichia coli DY612 RM systems
Ref: Lai,Y. et al. unpublished
REBASE ref # 36539
| Sequence length: | GenBank #: | |
| Chromosome: | 4,607,778 bp | CP047469 |
| plasmid pDY612-5: | 9,578 bp | CP047474 |
REBASE acronym: EcoDY612
Org_num: 66411
All begin GTK51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11595 | DUF45 domain-containing protein | |||
| 11600 | R | Ecos195ORF10135P (100% identity) | EcoDY612ORF11615P | |
| 11605 | UPF0149 family protein | |||
| 11610 | S | S.Ecos195ORF10135P (100% identity) | S1.EcoDY612ORF11615P | |
| 11615 | M | M.KpnLZORFCP (100% identity) | M.EcoDY612ORF11615P | |
| 11620 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | cell division protein DamX | |||
| 1865 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDY612DamP |
| 1870 | ribulose-phosphate 3-epimerase | |||
| 2485 | DUF2556 domain-containing protein | |||
| 2490 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoDY612ORF2490P |
| 2495 | DNA-binding transcriptional regulator Fis | |||
| 8670 | phosphohydrolase | |||
| 8675 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoDY612DcmP |
| 8680 | V | V.EcoSFE8DcmP (100% identity) | V.EcoDY612DcmP | |
| 8685 | drug/metabolite exporter YedA | |||
| 9295 | 73 aa hypothetical protein | |||
| 9300 | M | M.EcoMB51ORF9800P (100% identity) | M.EcoDY612ORF9300P | |
| 9305 | exonuclease | |||
| plasmid pDY612-5 | ||||
| 23465 | 115 aa hypothetical protein | |||
| 23470 | RM | Eco20023ORF285P (81% identity) | EcoDY612ORF23470P | |
| 23475 | mobilization protein MobX | |||