Flavobacterium species YJ01 |
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Putative Flavobacterium species YJ01 RM systems
Ref: Yang,J.K. et al. unpublished
REBASE ref # 36402
Complete sequence: 5,483,844 bp
GenBank #: CP119757
REBASE acronym: FspYJ01
Org_num: 65815
All begin P0R33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6185 | helix-turn-helix transcriptional regulator | |||
| 6190 | R | Csp274ORF1408P (86% identity) | FspYJ01ORF6205P | |
| 6195 | AAA family ATPase | |||
| 6200 | S | S.Tba623ORF5340P (75% identity) | S.FspYJ01ORF6205P | |
| 6205 | M | M.Fco81ORF4045P (90% identity) | M.FspYJ01ORF6205P | |
| 6210 | restriction endonuclease | |||
| 8360 | helix-turn-helix transcriptional regulator | |||
| 8365 | M | M.Fhi51468ORF18245P (96% identity) | M.FspYJ01ORF8365P | |
| 8370 | S | S1.Sth11429I (75% identity) | S1.FspYJ01ORF8365P | |
| 8375 | S | S2.Msp110ORF633P (41% identity) | S2.FspYJ01ORF8365P | |
| 8380 | site-specific integrase | |||
| 8385 | R | Fhi51468ORF14310P (94% identity) | FspYJ01ORF8365P | |
| 8390 | endonuclease/exonuclease/phosphatase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11130 | AsmA-like C-terminal region-containing protein | |||
| 11135 | M | M.FspTR2ORF6385P (95% identity) | M.FspYJ01ORF11135P | |
| 11140 | R | FspTR2ORF6385P (92% identity) | FspYJ01ORF11135P | |
| 11145 | 90 aa hypothetical protein | |||
| 14405 | site-specific integrase | |||
| 14410 | V | V.Fsp22763ORF16295P (92% identity) | V.FspYJ01ORF14415P | |
| 14415 | M | M.FjoG16ORF2975P (94% identity) | M.FspYJ01ORF14415P | |
| 14420 | 84 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6205 | type I restriction-modification system subunit | |||
| 6210 | R | PpoMEZ6MrrP (39% identity) | FspYJ01MrrP | |
| 6215 | 197 aa hypothetical protein | |||