Salmonella enterica subsp. enterica serovar 4,[5],12:i:- RM054 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- RM054 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,998,883 bp
GenBank #: CP117370
REBASE acronym: SenRM054
Org_num: 65349
All begin PQP97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20340 | restriction endonuclease | |||
| 20345 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenRM054ORF20350P |
| 20350 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenRM054ORF20350P |
| 20355 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenRM054ORF20350P |
| 20360 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenRM054DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM054ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3230 | DUF2732 family protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenRM054ORF3235P |
| 3240 | replication endonuclease | |||
| 6275 | ead/Ea22-like family protein | |||
| 6280 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenRM054ORF6280P |
| 6285 | DUF551 domain-containing protein | |||
| 9620 | PerC family transcriptional regulator | |||
| 9625 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.SenRM054ORF9625P |
| 9630 | RusA family crossover junction | |||
| 9875 | phosphohydrolase | |||
| 9880 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenRM054DcmP |
| 9885 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM054DcmP |
| 9890 | drug/metabolite exporter YedA | |||
| 20500 | BREX system P-loop protein BrxC | |||
| 20505 | RM | StyUK1IV (100% identity) | GATCAG | SenRM054ORF20505P |
| 20510 | AAA family ATPase | |||
| 22425 | LexA family transcriptional regulator | |||
| 22430 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenRM054ORF22430P |
| 22435 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18035 | small effector SsaA | |||
| 18040 | R | StyUK1IP (99% identity) | CAGAG | SenRM054ORF18045P |
| 18045 | M | M.StyUK1I (100% identity) | CAGAG | M.SenRM054ORF18045P |
| 18050 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20335 | BrnT family toxin | |||
| 20340 | R | StyUK1MrrP (100% identity) | SenRM054MrrP | |
| 20345 | type I restriction-modification system | |||
| 20525 | protease Lon-related BREX system protein BrxL | |||
| 20530 | R | StyLTMrrP (100% identity) | SenRM054Mrr2P | |
| 20535 | AAA domain-containing protein | |||