Xanthomonas campestris pv. campestris 08305 |
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Putative Xanthomonas campestris pv. campestris 08305 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,024,247 bp
GenBank #: CP066966
REBASE acronym: Xca8305
Org_num: 65575
All begin JH275_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2415 | 121 aa hypothetical protein | |||
| 2420 | R | Xcacc2ORF2325P (100% identity) | Xca8305ORF2440P | |
| 2425 | S | S.Xcacc2ORF2325P (100% identity) | S.Xca8305ORF2440P | |
| 2430 | AAA family ATPase | |||
| 2435 | virulence RhuM family protein | |||
| 2440 | M | M.Xcacc2ORF2325P (100% identity) | M.Xca8305ORF2440P | |
| 2445 | aminodeoxychorismate/anthranilate synthase | |||
| 6270 | M48 family metallopeptidase | |||
| 6275 | R | Xca983ORF6240P (100% identity) | Xca8305ORF6290P | |
| 6280 | S | S3.Xca983ORF6240P (100% identity) | S2.Xca8305ORF6290P | |
| 6285 | virulence RhuM family protein | |||
| 6290 | M | M.Xca983ORF6240P (100% identity) | M.Xca8305ORF6290P | |
| 6295 | S | S1.Xca983ORF6240P (100% identity) | S1.Xca8305ORF6290P | |
| 6300 | 86 aa hypothetical protein | |||
| 15740 | 98 aa hypothetical protein | |||
| 15745 | R | Xcacc2ORF16555P (89% identity) | GAGNNNNNNGTGC | Xca8305ORF15760P |
| 15750 | S | S.Xcacc2ORF16555P (100% identity) | GAGNNNNNNGTGC | S.Xca8305ORF15760P |
| 15755 | virulence RhuM family protein | |||
| 15760 | M | M.Xcacc2ORF16555P (21% identity) | GAGNNNNNNGTGC | M.Xca8305ORF15760BP |
| 15765 | IS5-like element IS1478 family transposase | |||
| 15770 | M | M.Xcacc2ORF16555P (78% identity) | GAGNNNNNNGTGC | M.Xca8305ORF15760AP |
| 15775 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 340 | 207 aa hypothetical protein | |||
| 345 | M | M.XcaCN05aORFFP (100% identity) | M.Xca8305ORF345P | |
| 350 | 279 aa hypothetical protein | |||
| 3085 | IS3-like element IS1404 family transposase | |||
| 3090 | R | Xcacc2ORF20495P (98% identity) | Xca8305ORF3090P | |
| 3095 | 90 aa hypothetical protein | |||
| 21170 | IS3 family transposase | |||
| 21175 | M | M.Xca8290ORF21610P (100% identity) | M.Xca8305ORF21175P | |
| 21180 | thymidine kinase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7140 | 71 aa hypothetical protein | |||
| 7145 | R | Xcacc2McrBP (100% identity) | Xca8305McrBP | |
| 7150 | R | Xcacc2McrCP (100% identity) | Xca8305McrCP | |
| 7155 | sensor histidine kinase | |||
| 15770 | SAM-dependent DNA methyltransferase | |||
| 15775 | R | Xcacc2MrrP (100% identity) | Xca8305MrrP | |
| 15780 | type II toxin-antitoxin system RelE/ParE family | |||