Salmonella enterica subsp. enterica serovar Typhi S6 |
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Putative Salmonella enterica subsp. enterica serovar Typhi S6 RM systems
Ref: Ho,P.-L. et al. unpublished
REBASE ref # 36285
Complete sequence: 4,777,665 bp
GenBank #: CP117290
REBASE acronym: SenTS6
Org_num: 65384
All begin PRW98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19220 | restriction endonuclease | |||
| 19225 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenTS6ORF19230P |
| 19230 | M | M.StyTORF4575P (99% identity) | GAANNNNNNNNTCGC | M.SenTS6ORF19230P |
| 19235 | S | S.Senst12ORF9800P (100% identity) | GAANNNNNNNNTCGC | S.SenTS6ORF19230P |
| 19240 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1725 | cell division protein DamX | |||
| 1730 | M | M.StyTDamP (100% identity) | GATC | M.SenTS6DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2205 | DUF2556 family protein | |||
| 2210 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenTS6ORF2210P |
| 2215 | DNA-binding transcriptional regulator Fis | |||
| 8765 | phosphohydrolase | |||
| 8770 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenTS6DcmP |
| 8775 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenTS6DcmP |
| 8780 | drug/metabolite exporter YedA | |||
| 14175 | DGQHR domain-containing protein | |||
| 14180 | M | M.StyTORF1926P (95% identity) | M.SenTS6ORF14180P | |
| 14185 | DUF4060 family protein | |||
| 19355 | YebC/PmpR family DNA-binding transcriptional | |||
| 19360 | R | Senst12ORF9665P (100% identity) | SenTS6ORF19360P | |
| 19365 | 64 aa hypothetical protein | |||
| 20440 | 3-5 exonuclease | |||
| 20445 | M | M.StyTORF4329P (100% identity) | GATC | M.SenTS6ORF20445P |
| 20450 | replication endonuclease | |||
| 22110 | TraR/DksA family transcriptional regulator | |||
| 22115 | M | M.StyTORF3409P (100% identity) | GATC | M.SenTS6ORF22115P |
| 22120 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17100 | small effector SsaA | |||
| 17105 | R | StyTORF2507P (99% identity) | CAGAG | SenTS6ORF17110P |
| 17110 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenTS6ORF17110P |
| 17115 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19215 | BrnT family toxin | |||
| 19220 | R | SenTS5MrrP (100% identity) | SenTS6MrrP | |
| 19225 | type I restriction-modification system | |||