Helicobacter winghamensis ATCC BAA-431 |
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Putative Helicobacter winghamensis ATCC BAA-431 RM systems
Ref: Majcher,M. et al. unpublished
REBASE ref # 36248
Complete sequence: 1,702,402 bp
GenBank #: CP063535
REBASE acronym: Hwi431
Org_num: 65263
All begin IP359_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2180 | 179 aa hypothetical protein | |||
| 2185 | M | M.Cup197059ORF1382P (98% identity) | M.Hwi431ORF2185P | |
| 2190 | S | S.Cup197059ORF1382P (67% identity) | S1.Hwi431ORF2185P | |
| 2195 | S | S.Cup197059ORF1382P (27% identity) | S2.Hwi431ORF2185P | |
| 2200 | 478 aa hypothetical protein | |||
| 3815 | rRNA pseudouridine synthase | |||
| 3820 | R | HbiAAQJHORF6440P (93% identity) | Hwi431ORF3835P | |
| 3825 | ATP-binding protein | |||
| 3830 | S | S.Cco551ORF6095P (75% identity) | S.Hwi431ORF3835P | |
| 3835 | M | M.Cup736ORF6795P (93% identity) | M.Hwi431ORF3835P | |
| 3840 | Cj0069 family protein | |||
| 6955 | aminoacetone oxidase family FAD-binding enzyme | |||
| 6960 | S | S2.Hwi488ORF7215P (67% identity) | S2.Hwi431ORF6995P | |
| 6965 | Holliday junction branch migration DNA helicase | |||
| 6970 | 3-methyl-2-oxobutanoate | |||
| 6975 | 123 aa hypothetical protein | |||
| 6980 | R | Hwi7711ORF6725P (99% identity) | Hwi431ORF6995P | |
| 6985 | RNA-directed DNA polymerase | |||
| 6990 | S | S1.Hci94105ORF1700P (65% identity) | S1.Hwi431ORF6995P | |
| 6995 | M | M.Hwi488ORF7215P (99% identity) | M.Hwi431ORF6995P | |
| 7000 | methyl-accepting chemotaxis protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 655 | 343 aa hypothetical protein | |||
| 660 | M | M.Hbi43879ORF2071P (95% identity) | M.Hwi431ORF660P | |
| 665 | R | Hwi170ORF305P (96% identity) | Hwi431ORF660P | |
| 670 | adenylosuccinate lyase | |||
| 1525 | dihydroxy-acid dehydratase | |||
| 1530 | M | M1.Hwi7711ORF1530P (100% identity) | M1.Hwi431ORF1530P | |
| 1535 | M | M2.Hwi7711ORF1530P (100% identity) | CCTC | M2.Hwi431ORF1530P |
| 1540 | R | Hwi7711ORF1530P (100% identity) | CCTC | Hwi431ORF1530P |
| 1545 | class I SAM-dependent methyltransferase | |||
| 1825 | flagellar basal body P-ring protein FlgI | |||
| 1830 | R | Hwi7711ORF1835P (100% identity) | TCGA | Hwi431ORF1835P |
| 1835 | M | M.Hwi7711ORF1835P (100% identity) | TCGA | M.Hwi431ORF1835P |
| 1840 | 115 aa hypothetical protein | |||
| 4390 | site-specific DNA-methyltransferase | |||
| 4395 | R | Hwi7711ORF3905P (100% identity) | Hwi431ORF4400P | |
| 4400 | M | M.Hwi7711ORF3905P (99% identity) | M.Hwi431ORF4400P | |
| 4405 | glutamine-hydrolyzing GMP synthase | |||
| 5015 | 100 aa hypothetical protein | |||
| 5020 | M | M.Hwi7711ORF4985P (98% identity) | M.Hwi431ORF5020P | |
| 5025 | phage tail protein | |||
| 5860 | 100 aa hypothetical protein | |||
| 5865 | M | M.Hwi7711ORF4985P (100% identity) | M.Hwi431ORF5865P | |
| 5870 | phage tail protein | |||
| 8190 | ribonuclease J | |||
| ??? | RM | Hwi430ORFPP (97% identity) | Hwi431ORF8195P | |
| 8210 | DUF2443 domain-containing protein | |||
| 8545 | fumarylacetoacetate hydrolase family protein | |||
| 8550 | S | S.Hwi488ORF8785P (95% identity) | S.Hwi431ORF8555P | |
| 8555 | RM | Hwi488ORF8785P (97% identity) | Hwi431ORF8555P | |
| 8565 | pseudogene | |||