Xanthomonas campestris pv. campestris 12049 |
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Putative Xanthomonas campestris pv. campestris 12049 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
| Sequence length: | GenBank #: | |
| Chromosome: | 5,135,440 bp | CP066943 |
| plasmid unnamed: | 154,345 bp | CP066944 |
REBASE acronym: Xca12049
Org_num: 65582
All begin JH293_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15625 | 98 aa hypothetical protein | |||
| 15630 | R | Xca18048ORF6080P (100% identity) | Xca12049ORF15645P | |
| ??? | S | S.XcaCN16ORFCP (100% identity) | S.Xca12049ORF15645P | |
| 15640 | virulence RhuM family protein | |||
| 15645 | M | M.Xcacc2ORF16555P (100% identity) | M.Xca12049ORF15645P | |
| 15650 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 565 | thymidine kinase | |||
| 570 | M | M.Xca8305ORF21175P (100% identity) | M.Xca12049ORF570P | |
| 575 | IS3 family transposase | |||
| 9585 | IS3 family transposase | |||
| 9590 | V | V.Xca814ORF11965P (95% identity) | V.Xca12049ORF9610P | |
| 9595 | 1844 aa hypothetical protein | |||
| 9600 | 510 aa hypothetical protein | |||
| 9605 | 711 aa hypothetical protein | |||
| 9610 | M | M.Xca814ORF11965P (99% identity) | M.Xca12049ORF9610P | |
| 9615 | type IV toxin-antitoxin system AbiEi family | |||
| 11670 | DEAD/DEAH box helicase | |||
| 11675 | RM | Xho2001ORF17555P (99% identity) | Xca12049ORF11675P | |
| 11680 | XRE family transcriptional regulator | |||
| 11740 | DNA topoisomerase III | |||
| 11745 | M | M.Xho2001ORF17625P (100% identity) | M.Xca12049ORF11745P | |
| 11750 | 70 aa hypothetical protein | |||
| 16100 | BREX-1 system phosphatase PglZ type A | |||
| 16105 | RM | Xca8290ORF16595P (70% identity) | Xca12049ORF16105P | |
| 16110 | BREX system P-loop protein BrxC | |||
| plasmid unnamed | ||||
| 22710 | 134 aa hypothetical protein | |||
| 22715 | M | M.Xca12112ORF22200P (100% identity) | M.Xca12049ORF22715P | |
| 22720 | 214 aa hypothetical protein | |||
| 22765 | recombination-associated protein RdgC | |||
| 22770 | M | M.Xca12112ORF22255P (100% identity) | M.Xca12049ORF22770P | |
| 22775 | 192 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6770 | 71 aa hypothetical protein | |||
| 6775 | R | Xcacc2McrBP (100% identity) | Xca12049McrBP | |
| 6780 | R | XcaCN13aMcrCP (100% identity) | Xca12049McrCP | |
| 6785 | sensor histidine kinase | |||
| 15645 | SAM-dependent DNA methyltransferase | |||
| 15650 | R | Xcacc2MrrP (100% identity) | Xca12049MrrP | |
| 15655 | type II toxin-antitoxin system RelE/ParE family | |||