Xanthomonas campestris pv. incanae CFBP1606 |
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Putative Xanthomonas campestris pv. incanae CFBP1606 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,008,578 bp
GenBank #: CP066923
REBASE acronym: Xca1606
Org_num: 65614
All begin JH295_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6245 | M48 family metallopeptidase | |||
| 6250 | R | Xca10008ORF6460P (99% identity) | Xca1606ORF6270P | |
| 6255 | S | S2.Xca5057ORF15900P (97% identity) | S2.Xca1606ORF6270P | |
| 6260 | virulence RhuM family protein | |||
| 6265 | damage-inducible protein D | |||
| 6270 | M | M.Xca4053ORF15165P (99% identity) | M.Xca1606ORF6270P | |
| 6275 | S | S.Xar26261ORF4420P (93% identity) | S1.Xca1606ORF6270P | |
| 6280 | 86 aa hypothetical protein | |||
| 15810 | 88 aa hypothetical protein | |||
| 15815 | R | XcaCN18ORFBP (87% identity) | GAGNNNNNNCTT | Xca1606ORF15830P |
| 15820 | S | S.Xca793ORF15865P (97% identity) | GAGNNNNNNCTT | S.Xca1606ORF15830P |
| 15825 | virulence RhuM family protein | |||
| 15830 | M | M.Xci2913ORFBP (97% identity) | GAGNNNNNNCTT | M.Xca1606ORF15830P |
| 15835 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3210 | pyruvate dehydrogenase (acetyl-transferring), | |||
| 3215 | M | M.AdeBP1ORF31885P (80% identity) | M.Xca1606ORF3215P | |
| 3225 | AIPR family protein | |||
| 10555 | AAA family ATPase | |||
| ??? | M | M.XciT21ORF12030P (99% identity) | M.Xca1606ORF10560P | |
| 10565 | DNA topoisomerase III | |||
| 10625 | helix-turn-helix domain-containing protein | |||
| 10630 | M | M.XprArg1ORF21085P (100% identity) | M.Xca1606ORF10630P | |
| 10635 | DEAD/DEAH box helicase family protein | |||
| 10640 | 231 aa hypothetical protein | |||
| 10645 | RM | XciAW16ORF1678P (63% identity) | Xca1606ORF10645P | |
| 10650 | IS1595 family transposase | |||
| 16185 | 134 aa hypothetical protein | |||
| 16190 | R | XarXcp1ORF20720P (27% identity) | Xca1606ORF16200P | |
| 16195 | V | V.Xar33ORF415P (87% identity) | V.Xca1606ORF16200P | |
| 16200 | M | M.XarXcp1ORF20720P (90% identity) | M.Xca1606ORF16200P | |
| 16205 | 127 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7130 | 71 aa hypothetical protein | |||
| 7135 | R | Xca793McrBP (99% identity) | Xca1606McrBP | |
| 7140 | R | Xca793McrCP (100% identity) | Xca1606McrCP | |
| 7145 | sensor histidine kinase | |||