|
Putative Salmonella enterica subsp. enterica serovar London L1 RM systems
Ref: Wen,H. unpublished
REBASE ref # 36179
Sequence length: | GenBank #: | |
Chromosome: | 4,684,039 bp | CP117698 |
plasmid unnamed1: | 102,202 bp | CP117699 |
REBASE acronym: SenLL1
Org_num: 65084
All begin PRJ38_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1840 | cell division protein DamX | |||
1845 | M | M.StyTDamP (100% identity) | GATC | M.SenLL1DamP |
1850 | ribulose-phosphate 3-epimerase | |||
2330 | DUF2556 family protein | |||
2335 | M | M.SenTC177ORF2255P (100% identity) | ATGCAT | M.SenLL1ORF2335P |
2340 | DNA-binding transcriptional regulator Fis | |||
8745 | phosphohydrolase | |||
8750 | M | M.SenSP5DcmP (100% identity) | CCWGG | M.SenLL1DcmP |
8755 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenLL1DcmP |
8760 | drug/metabolite exporter YedA | |||
14510 | replication endonuclease | |||
14515 | M | M.SenSP5ORF2922P (100% identity) | GATC | M.SenLL1ORF14515P |
14520 | TraR/DksA family transcriptional regulator | |||
19415 | YebC/PmpR family DNA-binding transcriptional | |||
19420 | R | SenZYXORFBP (100% identity) | SenLL1ORF19420P | |
19425 | primase-like DNA-binding domain-containing | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17060 | small effector SsaA | |||
17065 | R | Ssp6947IIP (100% identity) | CAGAG | SenLL1ORF17070P |
17070 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.SenLL1ORF17070P |
17075 | MFS transporter | |||
plasmid unnamed1 | ||||
22755 | IS3-like element ISSen4 family transposase | |||
22760 | R | SenSP5ORF35P (100% identity) | SenLL1ORF22765P | |
22765 | M | M.SenSP5ORF35P (100% identity) | M.SenLL1ORF22765P | |
22770 | 69 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19275 | BrnT family toxin | |||
19280 | R | StyTMrrP (100% identity) | SenLL1MrrP | |
19285 | type I restriction-modification system |