Escherichia albertii BIA_40 |
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Putative Escherichia albertii BIA_40 RM systems
Ref: Leszczynska,K. et al. unpublished
REBASE ref # 36141
| Sequence length: | GenBank #: | |
| Chromosome: | 4,826,552 bp | CP117586 |
| plasmid pEA40_1: | 95,160 bp | CP117587 |
| plasmid pEA40_2: | 79,665 bp | CP117588 |
REBASE acronym: Eal40
Org_num: 64883
All begin PS042_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20415 | cell filamentation protein Fic | |||
| 20420 | R | Eal2512ORF19435P (100% identity) | Eal40ORF20425P | |
| 20425 | M | M.Eal2512ORF19435P (99% identity) | M.Eal40ORF20425P | |
| 20430 | S | S.Eal2512ORF19435P (100% identity) | S.Eal40ORF20425P | |
| 20435 | endoribonuclease SymE | |||
| plasmid pEA40_1 | ||||
| 23935 | 3-phosphatase | |||
| 23940 | R | Eal48ORF23740P (100% identity) | Eal40ORF23950P | |
| 23945 | S | S.Eal15116ORF24380P (66% identity) | S.Eal40ORF23950P | |
| 23950 | M | M.Ecows53ORF23140P (99% identity) | M.Eal40ORF23950P | |
| 23955 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1765 | cell division protein DamX | |||
| 1770 | M | M.Eco4356DamP (100% identity) | GATC | M.Eal40DamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.Eco4356ORFEP (100% identity) | M.Eal40ORF2280P | |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 5585 | PerC family transcriptional regulator | |||
| 5590 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eal40ORF5590P |
| 5595 | LexA family transcriptional regulator | |||
| 5630 | 67 aa hypothetical protein | |||
| 5635 | M | M.Efe65411ORF2910P (100% identity) | M.Eal40ORF5635P | |
| 5640 | phage lysis protein EssD | |||
| 5765 | 257 aa hypothetical protein | |||
| 5770 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eal40ORF5770P |
| 5775 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eal40ORF5770P |
| 5780 | 121 aa hypothetical protein | |||
| 7820 | PerC family transcriptional regulator | |||
| 7825 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eal40ORF7825P |
| 7830 | LexA family transcriptional regulator | |||
| 9170 | recombination protein NinB | |||
| 9175 | M | M.Eco70218ORF23095P (99% identity) | GATC | M.Eal40ORF9175P |
| 9180 | NinE family protein | |||
| 9950 | phosphohydrolase | |||
| 9955 | M | M.Eal2512DcmP (100% identity) | CCWGG | M.Eal40DcmP |
| 9960 | V | V.EalTSADcmP (100% identity) | V.Eal40DcmP | |
| 9965 | drug/metabolite exporter YedA | |||
| 11190 | integration host factor subunit alpha | |||
| 11195 | M | M.Eal9976ORF10570P (100% identity) | M.Eal40ORF11195P | |
| 11200 | Com family DNA-binding transcriptional | |||
| 16100 | replication endonuclease | |||
| 16105 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eal40ORF16105P |
| 16110 | TraR/DksA family transcriptional regulator | |||
| 20700 | DUF6387 family protein | |||
| 20705 | R | SenNWU5ORF1685P (100% identity) | RCCGGY | Eal40ORF20710P |
| 20710 | M | M.Kpn7014ORF23940P (100% identity) | RCCGGY | M.Eal40ORF20710P |
| 20715 | tyrosine-type recombinase/integrase | |||
| plasmid pEA40_1 | ||||
| 23820 | recombination-associated protein RdgC | |||
| 23825 | M | M.Eco9071ORF4866P (100% identity) | M.Eal40ORF23825P | |
| 23830 | 86 aa hypothetical protein | |||
| plasmid pEA40_2 | ||||
| 24720 | group II intron reverse transcriptase/maturase | |||
| 24725 | M | M.Sfl60ORF25670P (89% identity) | M.Eal40ORF24725P | |
| 24730 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8025 | recombinase family protein | |||
| 8030 | R | Eal1471GmrSDP (100% identity) | Eal40GmrSDP | |
| 8035 | DinI-like family protein | |||
| 20435 | endoribonuclease SymE | |||
| 20440 | R | Eal2512GmrSDP (55% identity) | Eal40GmrSD2BP | |
| 20445 | R | Eal52GmrSDP (41% identity) | Eal40GmrSD2AP | |
| 20450 | GntR family transcriptional regulator | |||