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Putative Escherichia coli MLI106K4 RM systems
Ref: Riediger,M. and Zautner,A.E. unpublished
REBASE ref # 36146
Sequence length: | GenBank #: | |
Chromosome: | 4,981,147 bp | CP117053 |
plasmid p174_MLI106-4: | 174,496 bp | CP117050 |
REBASE acronym: Eco06K4
Org_num: 64909
All begin NL407_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19765 | GTPase family protein | |||
19770 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | M.Eco06K4ORF19770P |
19775 | S | S.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | S.Eco06K4ORF19770P |
19780 | R | Eco06K2ORF19780P (100% identity) | AAAYNNNNNNCTC | Eco06K4ORF19770P |
19785 | IS5-like element ISKpn26 family transposase | |||
21615 | adenine/cytosine-specific restriction | |||
21620 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco06K4ORF21625P |
21625 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco06K4ORF21625P |
21630 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco06K4ORF21625P |
21635 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2780 | cell division protein DamX | |||
2785 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco06K4DamP |
2790 | ribulose-phosphate 3-epimerase | |||
3415 | DUF2556 family protein | |||
3420 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco06K4ORF3420P |
3425 | DNA-binding transcriptional regulator Fis | |||
10650 | helix-turn-helix domain-containing protein | |||
10655 | M | M.Eco06K2ORF10660P (100% identity) | M.Eco06K4ORF10655P | |
10660 | RusA family crossover junction | |||
10900 | phosphohydrolase | |||
10905 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco06K4DcmP |
10910 | V | V.SflSTLE1DcmP (100% identity) | V.Eco06K4DcmP | |
10915 | drug/metabolite exporter YedA | |||
19680 | zinc ribbon domain-containing protein | |||
19685 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco06K4ORF19685P |
19690 | tyrosine-type recombinase/integrase | |||
plasmid p174_MLI106-4 | ||||
900 | 73 aa hypothetical protein | |||
905 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco06K4ORF905P | |
910 | 103 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21610 | GTPase | |||
21615 | R | Ssp28760MrrP (100% identity) | Eco06K4MrrP | |
21620 | type I restriction-modification system |