Escherichia coli CUVM3 |
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Putative Escherichia coli CUVM3 RM systems
Ref: Khine,N.O. et al. unpublished
REBASE ref # 36144
| Sequence length: | GenBank #: | |
| Chromosome: | 4,910,596 bp | CP116970 |
| plasmid pCUVM3.1: | 164,599 bp | CP116971 |
| plasmid pCUVM3.2: | 101,216 bp | CP116972 |
| plasmid pCUVM3.4: | 81,122 bp | CP116974 |
REBASE acronym: EcoCUVM3
Org_num: 64896
All begin PQP09_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | 501 aa hypothetical protein | |||
| 15 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.EcoCUVM3ORF15P |
| 20 | phage portal protein | |||
| 885 | phosphohydrolase | |||
| 890 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCUVM3DcmP |
| 895 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoCUVM3DcmP |
| 900 | drug/metabolite exporter YedA | |||
| 6835 | 141 aa hypothetical protein | |||
| 6840 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoCUVM3ORF6840P |
| 6845 | NinE family protein | |||
| 7055 | 273 aa hypothetical protein | |||
| 7060 | M | M.Kpn85054ORF16840P (100% identity) | M.EcoCUVM3ORF7060P | |
| 7065 | TraR/DksA family transcriptional regulator | |||
| 8015 | NinE family protein | |||
| 8020 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoCUVM3ORF8020P |
| 8025 | recombination protein NinB | |||
| 9140 | PerC family transcriptional regulator | |||
| 9145 | M | M.Eco9285ORF7505P (100% identity) | M.EcoCUVM3ORF9145P | |
| 9150 | DUF1382 family protein | |||
| 12975 | DNA-binding transcriptional regulator Fis | |||
| 12980 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.EcoCUVM3ORF12980P |
| 12985 | DUF2556 family protein | |||
| 13505 | ribulose-phosphate 3-epimerase | |||
| 13510 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCUVM3DamP |
| 13515 | cell division protein DamX | |||
| 19000 | 28 aa hypothetical protein | |||
| 19005 | M | M.Sen24770ORF310P (100% identity) | GATC | M.EcoCUVM3ORF19005P |
| 19010 | RusA family crossover junction | |||
| plasmid pCUVM3.1 | ||||
| 24865 | 59 aa hypothetical protein | |||
| 24870 | M | M.Ecoww7ORF24400P (100% identity) | M.EcoCUVM3ORF24870P | |
| 24875 | 103 aa hypothetical protein | |||
| plasmid pCUVM3.2 | ||||
| 25145 | 103 aa hypothetical protein | |||
| 25150 | M | M.StyR64ORFAP (100% identity) | M.EcoCUVM3ORF25150P | |
| 25155 | 73 aa hypothetical protein | |||
| plasmid pCUVM3.4 | ||||
| 26190 | 97 aa hypothetical protein | |||
| 26195 | M | M.Xca80ORFEP (100% identity) | M.EcoCUVM3ORF26195P | |
| 26200 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCUVM3.1 | ||||
| 24195 | 464 aa hypothetical protein | |||
| 24200 | R | Ecoww7ORF23780P (38% identity) | EcoCUVM3ORF24215BP | |
| 24205 | IS30-like element ISApl1 family transposase | |||
| 24210 | R | Ecoww7ORF23780P (61% identity) | EcoCUVM3ORF24215AP | |
| 24215 | M | M.Ecoww7ORF23780P (100% identity) | M.EcoCUVM3ORF24215P | |
| 24220 | DUF4391 domain-containing protein | |||