Xylella fastidiosa subsp. fastidiosa XYL461 |
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Putative Xylella fastidiosa subsp. fastidiosa XYL461 RM systems
Ref: Velasco-Amo,M.D.P. et al. Phytopathology (2022) In press
REBASE ref # 36083
Complete sequence: 2,540,594 bp
GenBank #: CP109897
REBASE acronym: Xfa461
Org_num: 64696
All begin OK116_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1420 | DUF45 domain-containing protein | |||
| ??? | R | Xfav13ORF1230P (100% identity) | Xfa461ORF1440P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa461ORF1440P | |
| ??? | M | M.XfaWM11ORF1245P (100% identity) | M.Xfa461ORF1440P | |
| 1460 | 57 aa hypothetical protein | |||
| 11305 | 62 aa hypothetical protein | |||
| 11310 | R | Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | Xfa461ORF11320P |
| 11315 | S | S.Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | S.Xfa461ORF11320P |
| 11320 | M | M.Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | M.Xfa461ORF11320P |
| 11325 | HNH endonuclease family protein | |||
| 11325 | HNH endonuclease family protein | |||
| 11330 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa461ORF11345P |
| 11335 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa461ORF11345P |
| 11340 | 87 aa hypothetical protein | |||
| 11345 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa461ORF11345P |
| 11350 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5900 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.Xfa461ORF5905P |
| 5915 | Ax21 family protein | |||
| 7345 | 60 aa hypothetical protein | |||
| 7350 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa461ORF7350P | |
| 7355 | 71 aa hypothetical protein | |||
| 7420 | low molecular weight phosphotyrosine protein | |||
| 7425 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa461ORF7425P | |
| 7430 | type II toxin-antitoxin system RelE/ParE family | |||
| 8835 | 41 aa hypothetical protein | |||
| 8840 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa461ORF8840P |
| 8845 | R | Xfav13ORF8585P (100% identity) | TTCGAA | Xfa461ORF8840P |
| 8850 | 69 aa hypothetical protein | |||
| 9050 | DNA primase | |||
| ??? | R | Xfav13ORF8800P (100% identity) | Xfa461ORF9060P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa461ORF9060P | |
| 9070 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4655 | 3-oxoacyl-ACP synthase III | |||
| 4660 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa461ORF4660P | |
| 4665 | R | Xfav13ORF4440P (100% identity) | Xfa461ORF4660P | |
| 4670 | alpha/beta fold hydrolase | |||