Escherichia coli DETEC-E480 |
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Putative Escherichia coli DETEC-E480 RM systems
Ref: Moran,R.A. et al. unpublished
REBASE ref # 36014
| Sequence length: | GenBank #: | |
| Chromosome: | 4,974,899 bp | CP116181 |
| plasmid pDETEC55: | 107,932 bp | CP116182 |
| plasmid pDETEC56: | 103,383 bp | CP116183 |
REBASE acronym: EcoE480
Org_num: 64505
All begin PIB86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18625 | type IV toxin-antitoxin system AbiEi family | |||
| 18630 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoE480ORF18635P |
| 18635 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoE480ORF18635P |
| 18640 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoE480ORF18635P |
| 18645 | ash family protein | |||
| 20445 | restriction endonuclease | |||
| 20450 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoE480ORF20450P |
| 20455 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoE480ORF20450P |
| 20460 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoE480ORF20450P |
| 20465 | endoribonuclease SymE | |||
| plasmid pDETEC55 | ||||
| 24890 | IS1-like element IS1A family transposase | |||
| 24895 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoE480ORF24905P |
| 24900 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoE480ORF24905P |
| 24905 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoE480ORF24905P |
| 24910 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoE480DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoE480ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 9265 | phosphohydrolase | |||
| 9270 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoE480DcmP |
| 9275 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoE480DcmP |
| 9280 | drug/metabolite exporter YedA | |||
| 14805 | helix-turn-helix transcriptional regulator | |||
| 14810 | M | M.KpnYN1ORFGP (89% identity) | M.EcoE480ORF14810P | |
| 14815 | 71 aa hypothetical protein | |||
| 20810 | McrC family protein | |||
| 20815 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoE480ORF20820P |
| 20820 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoE480ORF20820P |
| 20825 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoE480ORF20820P |
| 20830 | helix-turn-helix domain-containing protein | |||
| plasmid pDETEC55 | ||||
| 24830 | 73 aa hypothetical protein | |||
| 24835 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoE480ORF24835P |
| 24840 | 103 aa hypothetical protein | |||
| plasmid pDETEC56 | ||||
| 25275 | 97 aa hypothetical protein | |||
| 25280 | M | M.Xca80ORFEP (100% identity) | M.EcoE480ORF25280P | |
| 25285 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20800 | glycosyltransferase | |||
| 20805 | R | EcosS3McrBP (100% identity) | EcoE480McrBP | |
| 20810 | R | EcosS9McrCP (100% identity) | EcoE480McrCP | |
| 20815 | Alw26I/Eco31I/Esp3I family type II restriction | |||