Dickeya solani DsR34 |
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Putative Dickeya solani DsR34 RM systems
Ref: Sokolova,D. et al. unpublished
REBASE ref # 36011
Complete sequence: 4,919,828 bp
GenBank #: CP110886
REBASE acronym: Dso34
Org_num: 64474
All begin OQ520_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2130 | integrase arm-type DNA-binding domain-containing | |||
| 2135 | M | M.DsoMK16ORFBP (100% identity) | CNCANNNNNNNRTGG | M.Dso34ORF2135P |
| 2140 | S | S.DsoMK16ORFBP (100% identity) | CNCANNNNNNNRTGG | S.Dso34ORF2135P |
| 2145 | R | DsoMK16ORFBP (100% identity) | CNCANNNNNNNRTGG | Dso34ORF2135P |
| 2150 | RhuM family protein | |||
| 3315 | 153 aa hypothetical protein | |||
| 3320 | S | S.DsoMK16ORFAP (100% identity) | GAACNNNNNTGC | S.Dso34ORF3325P |
| 3325 | M | M.DsoMK16ORFAP (100% identity) | GAACNNNNNTGC | M.Dso34ORF3325P |
| 3330 | R | DsoMK16ORFAP (100% identity) | GAACNNNNNTGC | Dso34ORF3325P |
| 3335 | ribosomal protein S18-alanine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19400 | ribulose-phosphate 3-epimerase | |||
| 19405 | M | M.DsoMK16ORFEP (100% identity) | GATC | M.Dso34DamP |
| 19410 | SPOR domain-containing protein | |||
| 2210 | LysE/ArgO family amino acid transporter | |||
| 2215 | R | Dso99ORF445P (100% identity) | Dso34ORF2215P | |
| 2220 | MFS transporter | |||
| 8335 | 95 aa hypothetical protein | |||
| 8340 | M | M.Dso207ORF8340P (100% identity) | M.Dso34ORF8340P | |
| 8345 | R | Aca8LMORF6990P (78% identity) | Dso34ORF8340P | |
| 8350 | response regulator receiver domain | |||