Escherichia coli 98E11 |
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Putative Escherichia coli 98E11 RM systems
Ref: Yano,B. et al. unpublished
REBASE ref # 35969
| Sequence length: | GenBank #: | |
| Chromosome: | 5,767,030 bp | AP027181 |
| plasmid pO26_98E11_1: | 99,281 bp | AP027182 |
| plasmid pO26_98E11_2: | 92,173 bp | AP027183 |
REBASE acronym: EcoE11
Org_num: 64310
All begin F98E11_, F98E11_p1_, F98E11_p2_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1458 | 65 aa hypothetical protein | |||
| 1459 | M | M.EcoSO179ORF21175P (100% identity) | M.EcoE11ORF1459P | |
| 1460 | TciA/TerB-like protein | |||
| 1563 | recombination protein | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.EcoE11ORF1564P |
| 1565 | phage antirepressor protein | |||
| 2730 | amino acid exporter for phenylalanine | |||
| 2731 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoE11DcmP |
| 2732 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoE11DcmP |
| 2733 | 142 aa hypothetical protein | |||
| 3078 | 611 aa hypothetical protein | |||
| ??? | M | M.EcoSTEC416ORF20240P (100% identity) | GATC | M.EcoE11ORF3079P |
| 3080 | recombination protein | |||
| 3254 | 119 aa hypothetical protein | |||
| 3255 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoE11ORF3255P |
| 3256 | recombination protein | |||
| 3485 | 83 aa hypothetical protein | |||
| 3486 | M | M.EcoTCM3e1ORF6790P (100% identity) | M.EcoE11ORF3486P | |
| 3487 | serine/threonine-specific protein phosphatase 1 | |||
| 3635 | repressor | |||
| 3636 | M | M.EcoSTEC411ORF14855P (100% identity) | GATC | M.EcoE11ORF3636P |
| 3637 | 162 aa hypothetical protein | |||
| 4418 | global DNA-binding transcriptional dual | |||
| 4419 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE11ORF4419P |
| 4420 | 59 aa hypothetical protein | |||
| 4526 | D-ribulose-5-phosphate 3-epimerase | |||
| 4527 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE11DamP |
| 4528 | cell division protein DamX | |||
| plasmid pO26_98E11_1 | ||||
| 109 | 42 aa hypothetical protein | |||
| 110 | M | M.EcoE2865ORF5776P (100% identity) | M.EcoE11ORF110P | |
| 111 | recombination-associated protein rdgC | |||
| plasmid pO26_98E11_2 | ||||
| 51 | 308 aa hypothetical protein | |||
| 52 | M | M.EcopO26ORF185P (100% identity) | SAY | M.EcoE11ORF52P |
| 53 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pO26_98E11_1 | ||||
| 47 | 82 aa hypothetical protein | |||
| 48 | M | M.EcoE2865ORF5722P (100% identity) | CAGCAG | M.EcoE11ORF48P |
| 49 | R | EcoE2865ORF5722P (100% identity) | CAGCAG | EcoE11ORF48P |
| 50 | 434 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5602 | 54 aa hypothetical protein | |||
| 5603 | R | EcoSTEC508GmrSDP (100% identity) | EcoE11GmrSDP | |
| 5604 | toxic peptide regulated by antisense sRNA symR | |||