Avibacterium paragallinarum C-AP4 |
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Putative Avibacterium paragallinarum C-AP4 RM systems
Ref: Zhang,J.P. unpublished
REBASE ref # 35746
Complete sequence: 2,592,260 bp
GenBank #: CP113955
REBASE acronym: ApaCAP4
Org_num: 63620
All begin OW731_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1570 | pyridoxal phosphate-dependent aminotransferase | |||
| 1575 | R | Apap4ORF1655P (100% identity) | ApaCAP4ORF1595P | |
| 1580 | ATP F0F1 synthase synthase | |||
| 1585 | S | S.Apap4ORF1655P (100% identity) | S.ApaCAP4ORF1595P | |
| 1590 | DNA binding domain-containing protein | |||
| 1595 | M | M.Apap4ORF1655P (100% identity) | M.ApaCAP4ORF1595P | |
| 1600 | fatty acid metabolism transcriptional regulator | |||
| 7290 | DUF262 domain-containing protein | |||
| 7295 | R | Apap4ORF12165P (100% identity) | ApaCAP4ORF7295P | |
| 7300 | S | S1.Apap4ORF12165P (100% identity) | S1.ApaCAP4ORF7295P | |
| 7305 | S | S2.Apap4ORF12165P (100% identity) | S2.ApaCAP4ORF7295P | |
| 7310 | S | S3.Apap4ORF12165P (100% identity) | S3.ApaCAP4ORF7295P | |
| 7315 | MFS transporter | |||
| 9965 | YajG family lipoprotein | |||
| 9970 | M | M.ApaCLORF7570P (91% identity) | M.ApaCAP4ORF9970P | |
| 9975 | S | S.ApaZ3CORFDP (61% identity) | S.ApaCAP4ORF9970P | |
| 9980 | 308 aa hypothetical protein | |||
| 9985 | 259 aa hypothetical protein | |||
| 9990 | R | Apap4ORF12860P (100% identity) | ApaCAP4ORF9970P | |
| 10000 | metallophosphoesterase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4395 | endolytic transglycosylase MltG | |||
| 4400 | RM | ApaZ3CORFFP (85% identity) | ApaCAP4ORF4400P | |
| 4405 | phosphoglycerate dehydrogenase | |||
| 6495 | 153 aa hypothetical protein | |||
| 6500 | M | M1.Apap4ORF13055P (100% identity) | M1.ApaCAP4ORF6500P | |
| 6505 | M | M2.Apap4ORF13055P (100% identity) | M2.ApaCAP4ORF6500P | |
| 6510 | RM | Apap4ORF13055P (100% identity) | ApaCAP4ORF6500P | |
| 6515 | 30S ribosomal protein S12 methylthiotransferase | |||
| 9815 | DciA family protein | |||
| 9820 | M | M.ApasMORFNP (100% identity) | GATC | M.ApaCAP4ORF9820P |
| 9825 | 3-dehydroquinate synthase | |||
| 10025 | 62 aa hypothetical protein | |||
| 10030 | M | M.Apap4ORF2215P (100% identity) | M.ApaCAP4ORF10030P | |
| 10035 | DNA methyltransferase | |||
| 10195 | ATP-binding protein | |||
| 10200 | M | M.Apap4ORF7290P (100% identity) | M.ApaCAP4ORF10200P | |
| 10205 | recombination protein NinB | |||
| 11630 | replication protein P | |||
| 11635 | M | M.Apap4ORF7715P (100% identity) | M.ApaCAP4ORF11635P | |
| 11640 | DUF1367 family protein | |||
| 12630 | SPFH domain-containing protein | |||
| 12635 | M | M2.Apap4ORF7445P (86% identity) | M1.ApaCAP4ORF12635P | |
| 12640 | M | M1.Apap4ORF7925P (91% identity) | M2.ApaCAP4ORF12635P | |
| 12645 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5155 | IS1595 family transposase | |||
| 5170 | R | Apap4ORF2990P (100% identity) | ApaCAP4ORF5175P | |
| 5175 | M | M.ApaCAP1ORF3060BP (100% identity) | M.ApaCAP4ORF5175BP | |
| 5180 | M | M.ApaZ3CORFIAP (100% identity) | M.ApaCAP4ORF5175AP | |
| 5185 | 381 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7285 | virulence RhuM family protein | |||
| 7290 | R | ApaZ3CGmrSDP (100% identity) | ApaCAP4GmrSDP | |
| 7295 | DEAD/DEAH box helicase family protein | |||