Escherichia coli GN02350 |
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Putative Escherichia coli GN02350 RM systems
Ref: Bethke,J.H. et al. unpublished
REBASE ref # 35779
| Sequence length: | GenBank #: | |
| Chromosome: | 5,215,336 bp | CP095518 |
| plasmid p2350-1: | 117,950 bp | CP095519 |
REBASE acronym: Eco02350
Org_num: 63723
All begin MW405_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6115 | adenine/cytosine-specific restriction | |||
| 6120 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco02350ORF6125P |
| 6125 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco02350ORF6125P |
| 6130 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco02350ORF6125P |
| 6135 | endoribonuclease SymE | |||
| 14100 | restriction system-associated AAA family ATPase | |||
| 14105 | S | S.EcoDEC8DORF4208P (100% identity) | GTANNNNNNGTCG | S.Eco02350ORF14110P |
| 14110 | M | M.Ecos671ORFGP (100% identity) | GTANNNNNNGTCG | M.Eco02350ORF14110P |
| 14115 | R | Ecos671ORFGP (96% identity) | GTANNNNNNGTCG | Eco02350ORF14110P |
| 14120 | TIGR03761 family integrating conjugative element | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7660 | response regulator receiver domain | |||
| 7665 | R | EcosS3ORF15775P (100% identity) | Eco02350ORF7670P | |
| 7670 | M | M.EcosS3ORF15775P (100% identity) | M.Eco02350ORF7670P | |
| 7675 | conjugal transfer protein TraG N-terminal | |||
| 12435 | cell division protein DamX | |||
| 12440 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco02350DamP |
| 12445 | ribulose-phosphate 3-epimerase | |||
| 13035 | DUF2556 family protein | |||
| 13040 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco02350ORF13040P |
| 13045 | DNA-binding transcriptional regulator Fis | |||
| 17580 | DUF1382 family protein | |||
| 17585 | M | M.EfeC23ORF6940P (100% identity) | GATC | M.Eco02350ORF17585P |
| 17590 | PerC family transcriptional regulator | |||
| 20870 | phosphohydrolase | |||
| 20875 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco02350DcmP |
| 20880 | V | V.EcoYP3DcmP (100% identity) | V.Eco02350DcmP | |
| 20885 | drug/metabolite exporter YedA | |||
| plasmid p2350-1 | ||||
| 25350 | 103 aa hypothetical protein | |||
| 25355 | M | M.Sfl2142ORF380P (100% identity) | M.Eco02350ORF25355P | |
| 25360 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6110 | GTPase | |||
| 6115 | R | SenHNK130MrrP (100% identity) | Eco02350MrrP | |
| 6120 | type I restriction-modification system | |||