Aminobacter niigataensis MD1 |
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Putative Aminobacter niigataensis MD1 RM systems
Ref: Vuilleumier,S. unpublished
REBASE ref # 35742
| Sequence length: | GenBank #: | |
| chromosome AMD1: | 4,947,010 bp | OX341517 |
| plasmid paAMD1: | 363,670 bp | OX341518 |
| plasmid pbAMD1: | 24,942 bp | OX341520 |
REBASE acronym: AniMD1
Org_num: 63611
All begin AMD1_, AMD1_PA, AMD1_PB
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome AMD1 | ||||
| 962 | ATPase AAA | |||
| 963 | M | M.Scl10874ORF1024600P (87% identity) | M.AniMD1ORF963P | |
| 964 | conserved protein of unknown function | |||
| 965 | R | OanPBOORF19650P (95% identity) | AniMD1ORF963P | |
| 966 | Transcriptional regulator | |||
| 1161 | protein of unknown function | |||
| 1162 | M | M.Rme6155ORFEP (64% identity) | M.AniMD1ORF1162P | |
| 1163 | conserved protein of unknown function | |||
| 3360 | conserved protein of unknown function | |||
| 3361 | R | AspP9bORF16740P (98% identity) | AniMD1ORF3361P | |
| 3362 | conserved membrane protein of unknown function | |||
| plasmid pbAMD1 | ||||
| 24 | TNCP26 | |||
| 25 | R | Pae326ORF27730P (100% identity) | AniMD1ORF26P | |
| 26 | M | M.Ecod58ORF1995P (100% identity) | M.AniMD1ORF26P | |
| 27 | protein of unknown function | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid paAMD1 | ||||
| 63 | Helix-turn-helix domain protein | |||
| 64 | R | AspNLF57GmrSDP (63% identity) | AniMD1GmrSDP | |
| 65 | conserved protein of unknown function | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome AMD1 | ||||
| 4507 | Hydrolase, haloacid dehalogenase-like family | |||
| 4508 | M | M.AspSH1ORF4540P (99% identity) | GANTC | M.AniMD1ORF4508P |
| 4509 | 6-phosphogluconate phosphatase | |||