Escherichia coli MS1679 |
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Putative Escherichia coli MS1679 RM systems
Ref: Jia,L. et al. unpublished
REBASE ref # 35727
Complete sequence: 5,174,434 bp
GenBank #: CP097719
REBASE acronym: EcoMS1679
Org_num: 63561
All begin M9O74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21310 | restriction endonuclease | |||
| 21315 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.EcoMS1679ORF21315P |
| 21320 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.EcoMS1679ORF21315P |
| 21325 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | EcoMS1679ORF21315P |
| 21330 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 335 | osmoprotectant transport activator ProQ | |||
| 340 | M | M.SflFF24DndBP (100% identity) | M.EcoMS1679DndBP | |
| 345 | DNA phosphorothioation system sulfurtransferase | |||
| 340 | DNA sulfur modification protein DndB | |||
| 345 | M | M.SflFF24DndCP (100% identity) | M.EcoMS1679DndCP | |
| 350 | DNA sulfur modification protein DndD | |||
| 345 | DNA phosphorothioation system sulfurtransferase | |||
| 350 | M | M.SflFF24DndDP (100% identity) | M.EcoMS1679DndDP | |
| 355 | DNA sulfur modification protein DndE | |||
| 350 | DNA sulfur modification protein DndD | |||
| 355 | M | M.SflFF24DndEP (100% identity) | M.EcoMS1679DndEP | |
| 360 | DGQHR domain-containing protein | |||
| 370 | accessory gene regulator B family protein | |||
| 375 | R | EcosEC5DptHP (100% identity) | EcoMS1679DptHP | |
| 380 | DNA phosphorothioation-dependent restriction | |||
| 375 | DNA phosphorothioation-dependent restriction | |||
| 380 | R | SflFF24DptGP (100% identity) | EcoMS1679DptGP | |
| 385 | DNA phosphorothioation-dependent restriction | |||
| 380 | DNA phosphorothioation-dependent restriction | |||
| 385 | R | SflFF24DptFP (100% identity) | EcoMS1679DptFP | |
| 390 | integrase | |||
| 1910 | cell division protein DamX | |||
| 1915 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMS1679DamP |
| 1920 | ribulose-phosphate 3-epimerase | |||
| 2510 | DUF2556 family protein | |||
| 2515 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoMS1679ORF2515P |
| 2520 | DNA-binding transcriptional regulator Fis | |||
| 10110 | phosphohydrolase | |||
| 10115 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoMS1679DcmP |
| 10120 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoMS1679DcmP |
| 10125 | drug/metabolite exporter YedA | |||
| 16895 | NinE family protein | |||
| 16900 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoMS1679ORF16900P |
| 16905 | recombination protein NinB | |||
| 21500 | HNH endonuclease | |||
| 21505 | R | SflFF17ORF19275P (100% identity) | EcoMS1679ORF21505P | |
| 21510 | peptidase | |||
| 23200 | LexA family transcriptional regulator | |||
| 23205 | M | M.EcoS30ORF19345P (100% identity) | GATC | M.EcoMS1679ORF23205P |
| 23210 | PerC family transcriptional regulator | |||
| 24170 | phage portal protein | |||
| 24175 | R | Eho218ORF15P (100% identity) | GTCGAC | EcoMS1679ORF24180P |
| 24180 | M | M.SflFF22ORF10P (100% identity) | GTCGAC | M.EcoMS1679ORF24180P |
| 24185 | replication endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21305 | BrnT family toxin | |||
| 21310 | R | EfeE4C07MrrP (100% identity) | EcoMS1679MrrP | |
| 21315 | type I restriction-modification system subunit | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14740 | LexA family transcriptional regulator | |||
| 14745 | M | M.EcoR15ORF19935P (100% identity) | GATC | M.EcoMS1679ORF14745P |
| 14750 | PerC family transcriptional regulator | |||