Escherichia coli J53-p130 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli J53-p130 RM systems
Ref: Tian,D. unpublished
REBASE ref # 33986
| Sequence length: | GenBank #: | |
| Chromosome: | 4,680,961 bp | CP111008 |
| plasmid p130-2: | 69,242 bp | CP111010 |
REBASE acronym: Ecop130
Org_num: 63363
All begin ORI87_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1040 | cell division protein DamX | |||
| 1045 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecop130DamP |
| 1050 | ribulose-phosphate 3-epimerase | |||
| 1665 | DUF2556 family protein | |||
| 1670 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Ecop130ORF1670P |
| 1675 | DNA-binding transcriptional regulator Fis | |||
| 8195 | phosphohydrolase | |||
| 8200 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Ecop130DcmP |
| 8205 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Ecop130DcmP |
| 8210 | drug/metabolite exporter YedA | |||
| plasmid p130-2 | ||||
| 24235 | EAL domain-containing protein | |||
| 24240 | R | YpsR1ORFAP (100% identity) | CCWGG | Ecop130ORF24245P |
| 24245 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Ecop130ORF24245P |
| 24250 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12405 | isocitrate/isopropylmalate family dehydrogenase | |||
| 12410 | R | SsoSE61ORF22640P (100% identity) | YCGR | Ecop130ORF12410P |
| 12415 | site-specific DNA recombinase | |||
| 18840 | GTPase | |||
| 18845 | R | SenHNK130MrrP (100% identity) | Ecop130MrrP | |
| 18850 | type I restriction-modification system | |||
| 18865 | endoribonuclease SymE | |||
| 18870 | R | SenHNK130McrBP (100% identity) | Ecop130McrBP | |
| 18875 | R | SenHNK130McrCP (100% identity) | Ecop130McrCP | |
| 18880 | 978 aa hypothetical protein | |||