Clostridium botulinum Osaka2020 |
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Putative Clostridium botulinum Osaka2020 RM systems
Ref: Umeda,K. et al. FEMS Microbiol Lett 369 (1) (2022)
REBASE ref # 35669
| Sequence length: | GenBank #: | |
| Chromosome: | 3,844,908 bp | AP025140 |
| plasmid pOsaka2020-1: | 274,256 bp | AP025141 |
REBASE acronym: Cbo2020
Org_num: 63350
All begin CBOS2020_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19810 | 333 aa hypothetical protein | |||
| 19820 | R | CboF634IIIP (99% identity) | AGCNNNNGCT | Cbo2020ORF19850P |
| 19830 | 301 aa hypothetical protein | |||
| 19840 | S | S.CboF634III (100% identity) | AGCNNNNGCT | S.Cbo2020ORF19850P |
| 19850 | M | M.CboF634III (100% identity) | AGCNNNNGCT | M.Cbo2020ORF19850P |
| 19860 | C | C.CboF634ORF1988P (100% identity) | C.Cbo2020ORF19850P | |
| 19870 | 389 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12580 | 3-methyladenine DNA glycosylase | |||
| 12590 | M | CboV73ORF12445P (99% identity) | M.Cbo2020ORF12590P | |
| 12600 | methylthioribose kinase | |||
| 29860 | 68 aa hypothetical protein | |||
| 29870 | M | M.CboV73ORF3175P (99% identity) | CAAAAAR | M.Cbo2020ORF29870P |
| 29880 | delta-lactam-biosynthetic de-N-acetylase | |||
| plasmid pOsaka2020-1 | ||||
| 36750 | 127 aa hypothetical protein | |||
| 36760 | M | M.CboFORF2433P (99% identity) | M.Cbo2020ORF36760P | |
| 36770 | 110 aa hypothetical protein | |||
| 38240 | 158 aa hypothetical protein | |||
| 38250 | M | M.CboA3ORF203P (99% identity) | M.Cbo2020ORF38250P | |
| 38260 | 271 aa hypothetical protein | |||
| 38300 | 40 aa hypothetical protein | |||
| 38310 | M | M.CboBRBORF3838P (98% identity) | M.Cbo2020ORF38310P | |
| 38320 | 118 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 33250 | 167 aa hypothetical protein | |||
| 33260 | R | Tye11347ORF1189P (65% identity) | Cbo2020ORF33270P | |
| 33270 | M | M.Tye11347ORF1189P (51% identity) | M.Cbo2020ORF33270P | |
| 33280 | 509 aa hypothetical protein | |||