Escherichia coli THB42-F4 |
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Putative Escherichia coli THB42-F4 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 35189
| Sequence length: | GenBank #: | |
| Chromosome: | 4,602,352 bp | CP110814 |
| plasmid pHB42-F4: | 162,755 bp | CP110815 |
REBASE acronym: Eco42F4
Org_num: 63366
All begin N0552_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco42F4DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco42F4ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 8780 | phosphohydrolase | |||
| 8785 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco42F4DcmP |
| 8790 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco42F4DcmP |
| 8795 | drug/metabolite exporter YedA | |||
| plasmid pHB42-F4 | ||||
| 22970 | 97 aa hypothetical protein | |||
| 22975 | M | M.Xca80ORFEP (100% identity) | M.Eco42F4ORF22975P | |
| 22980 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12995 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13000 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco42F4ORF13000P |
| 13005 | site-specific DNA recombinase | |||
| 19030 | GTPase | |||
| 19035 | R | SenHNK130MrrP (100% identity) | Eco42F4MrrP | |
| 19040 | type I restriction-modification system | |||
| 19055 | endoribonuclease SymE | |||
| 19060 | R | EcoVir2McrBP (100% identity) | Eco42F4McrBP | |
| 19065 | R | SenHNK130McrCP (100% identity) | Eco42F4McrCP | |
| 19070 | 978 aa hypothetical protein | |||