Rhodococcus rhodochrous GD02 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Rhodococcus rhodochrous GD02 RM systems
Ref: Navas,L.E. et al. Front Microbiol 12, 735000 (2021)
REBASE ref # 35610
| Sequence length: | GenBank #: | |
| Chromosome: | 5,587,176 bp | CP083974 |
| plasmid pGD02.2.1: | 721,409 bp | CP083975 |
REBASE acronym: RrhGD02
Org_num: 63156
All begin KUM34_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1345 | acyl-CoA dehydrogenase family protein | |||
| 1350 | V | V.RspPD04ORF1350P (99% identity) | V.RrhGD02ORF1355P | |
| 1355 | M | M.RspPD04ORF1350P (100% identity) | CTCGAG | M.RrhGD02ORF1355P |
| 1360 | 507 aa hypothetical protein CFC35_33630 | |||
| plasmid pGD02.2.1 | ||||
| 27995 | DUF499 domain-containing protein | |||
| 28000 | M | M.MspA226ORF44P (38% identity) | M.RrhGD02ORF28000BP | |
| 28005 | IS256 family transposase | |||
| ??? | M | M.San10ORF20265P (19% identity) | M.RrhGD02ORF28000AP | |
| 28010 | R | Rop14ORF38935P (13% identity) | RrhGD02ORF28000BP | |
| 28015 | IS256 family transposase | |||
| 28020 | R | Rop14ORF38935P (71% identity) | RrhGD02ORF28000AP | |
| 28025 | helix-turn-helix transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6505 | redox-regulated ATPase YchF | |||
| 6510 | R | RspGA1McrCP (98% identity) | RrhGD02McrCP | |
| 6515 | R | RspPD04McrBP (100% identity) | RrhGD02McrBP | |
| 6520 | arabinofuranosidase | |||
| 7020 | carotenoid oxygenase family protein | |||
| 7025 | R | RspPD04MrrP (100% identity) | RrhGD02MrrP | |
| 7030 | DUF1906 domain-containing protein | |||