Neisseria gonorrhoeae 10272 |
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Putative Neisseria gonorrhoeae 10272 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,219,268 bp
GenBank #: CP106921
REBASE acronym: Ngo10272
Org_num: 63077
All begin NDL74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4815 | ABC transporter | |||
| 4820 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo10272ORF4820P |
| 4825 | 280 aa hypothetical protein | |||
| 4830 | 186 aa hypothetical protein | |||
| 4835 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo10272ORF4820P |
| 4840 | hydroxyacid dehydrogenase | |||
| 4845 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo10272ORF4820P |
| 4850 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo10272ORF40P |
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.Ngo10272ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1535 | phenylalanine--tRNA ligase subunit alpha | |||
| 1540 | V | V.NgoWSORF391P (100% identity) | V.Ngo10272ORF1545P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo10272ORF1545P |
| 1555 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo10272ORF1545P |
| 1560 | phenylalanine--tRNA ligase subunit beta | |||
| 1830 | IS1595 family transposase | |||
| 1835 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo10272ORF1835P |
| 1840 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo10272ORF1835P |
| 1845 | 140 aa hypothetical protein | |||
| 1865 | uroporphyrinogen decarboxylase | |||
| 1870 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo10272ORF1880P | |
| 1875 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo10272ORF1880P |
| 1880 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo10272ORF1880P |
| 1885 | DNA repair protein RadA | |||
| 3660 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 3665 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo10272ORF3670P |
| 3670 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo10272ORF3670P |
| 3675 | anthranilate synthase component I | |||
| 4945 | 3-isopropylmalate dehydratase small subunit | |||
| 4950 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo10272ORF4950P |
| 4955 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo10272ORF4950P |
| 4960 | 3-isopropylmalate dehydrogenase | |||
| 6100 | replication initiation factor domain-containing | |||
| 6105 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo10272ORF6120P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo10272ORF6120P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo10272ORF6120P |
| 6130 | 48 aa hypothetical protein | |||
| 9590 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo10272ORF9605P |
| 9605 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo10272ORF9605P |
| 9610 | ribosome recycling factor | |||
| 10130 | IS5/IS1182 family transposase | |||
| 10135 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo10272ORF10140P |
| 10140 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo10272ORF10140P |
| 10145 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo10272ORF10140P |
| 10150 | RNA-binding transcriptional accessory protein | |||
| 10690 | GTPase ObgE | |||
| 10695 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo10272ORF10695P |
| 10700 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo10272ORF10695P |
| 10705 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5125 | tRNA pseudouridine(55) synthase TruB | |||
| 5130 | M | M2.Ngo10795ORF3270P (99% identity) | ACACC | M.Ngo10272ORF5130AP |
| 5135 | M | M.Ngo9126ORF3235BP (100% identity) | ACACC | M.Ngo10272ORF5130BP |
| 5140 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo10272ORF5130P |
| 5145 | alpha-hydroxy-acid oxidizing protein | |||
| 5595 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5600 | R | Ngos1291ORF8455P (100% identity) | Ngo10272ORF5605P | |
| 5605 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo10272ORF5605P | |
| 5610 | peptidylprolyl isomerase | |||