Neisseria gonorrhoeae 9071 |
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Putative Neisseria gonorrhoeae 9071 RM systems
Ref: Shaskolskiy,B. and Kandinov,I. unpublished
REBASE ref # 35250
Complete sequence: 2,263,505 bp
GenBank #: CP106918
REBASE acronym: Ngo9071
Org_num: 63078
All begin ND436_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5275 | ABC transporter | |||
| 5280 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.Ngo9071ORF5280P |
| 5285 | 280 aa hypothetical protein | |||
| 5290 | 186 aa hypothetical protein | |||
| 5295 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo9071ORF5280P |
| 5300 | hydroxyacid dehydrogenase | |||
| 5305 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | Ngo9071ORF5280P |
| 5310 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo9071ORF40P |
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo9071ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1535 | phenylalanine--tRNA ligase subunit alpha | |||
| 1540 | V | V.NgoWSORF391P (100% identity) | V.Ngo9071ORF1545P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo9071ORF1545P |
| 1555 | R | Ngo9399ORF1545P (100% identity) | CCGG | Ngo9071ORF1545P |
| 1560 | phenylalanine--tRNA ligase subunit beta | |||
| 1830 | IS1595 family transposase | |||
| 1835 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo9071ORF1835P |
| 1840 | S | S.NgoFA19ORF100P (100% identity) | GACNNNNNTGA | S.Ngo9071ORF1835P |
| 1845 | 129 aa hypothetical protein | |||
| 1865 | uroporphyrinogen decarboxylase | |||
| 1870 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo9071ORF1880P | |
| 1875 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo9071ORF1880P |
| 1880 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo9071ORF1880P |
| 1885 | DNA repair protein RadA | |||
| 4110 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4115 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo9071ORF4120P |
| 4120 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo9071ORF4120P |
| 4125 | anthranilate synthase component I | |||
| 5405 | 3-isopropylmalate dehydratase small subunit | |||
| 5410 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo9071ORF5410P |
| 5415 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo9071ORF5410P |
| 5420 | 3-isopropylmalate dehydrogenase | |||
| 6570 | replication initiation factor domain-containing | |||
| 6575 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo9071ORF6590P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo9071ORF6590P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo9071ORF6590P |
| 6600 | 48 aa hypothetical protein | |||
| 10065 | FUSC family protein | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | Ngo9071ORF10080P |
| 10080 | M | M.Ngo9112ORF10980P (100% identity) | GGCC | M.Ngo9071ORF10080P |
| 10085 | ribosome recycling factor | |||
| 10605 | IS5/IS1182 family transposase | |||
| 10610 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo9071ORF10615P |
| 10615 | M | M1.NgoFA19I (100% identity) | GGTGA | M1.Ngo9071ORF10615P |
| 10620 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo9071ORF10615P |
| 10625 | RNA-binding transcriptional accessory protein | |||
| 11160 | GTPase ObgE | |||
| 11165 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo9071ORF11165P |
| 11170 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo9071ORF11165P |
| 11175 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5585 | tRNA pseudouridine(55) synthase TruB | |||
| 5590 | M | M.NgoD159ORF3485P (98% identity) | ACACC | M.Ngo9071ORF5590P |
| 5595 | R | NgoFA19ORF379P (100% identity) | ACACC | Ngo9071ORF5590P |
| 5600 | alpha-hydroxy-acid oxidizing protein | |||
| 6050 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6055 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo9071ORF6060P |
| ??? | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo9071ORF6060P |
| 6070 | peptidylprolyl isomerase | |||