Klebsiella pneumoniae INF102 |
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Putative Klebsiella pneumoniae INF102 RM systems
Ref: Foster-Nyarko,E. et al. unpublished
REBASE ref # 31476
| Sequence length: | GenBank #: | |
| Chromosome: | 5,233,063 bp | CP110762 |
| plasmid pINF102.4: | 43,158 bp | CP110760 |
| plasmid pINF102.5: | 103,831 bp | CP110757 |
| plasmid pINF102.6: | 125,521 bp | CP110759 |
REBASE acronym: Kpn9897
Org_num: 45541
All begin JMX38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16905 | helix-turn-helix domain-containing protein | |||
| 16910 | M | M.Pre393ORF2750P (100% identity) | M.Kpn9897ORFAP | |
| 16915 | S | S.Pre393ORF2750P (100% identity) | S.Kpn9897ORFAP | |
| 16920 | RecQ family ATP-dependent DNA helicase | |||
| 16925 | DNA-protecting protein DprA | |||
| 16930 | R | SenXB08ORF21250P (100% identity) | Kpn9897ORFAP | |
| 16935 | lytic transglycosylase F | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6630 | drug/metabolite exporter YedA | |||
| 6635 | V | V.KpnS1313DcmP (100% identity) | V.Kpn9897Dcm2P | |
| 6640 | M | M.Kpn00503DcmP (100% identity) | CCWGG | M.Kpn9897Dcm2P |
| 6645 | phosphohydrolase | |||
| 11105 | 53 aa hypothetical protein | |||
| 11110 | R | Kpn9897ORFFP (91% identity) | Kpn9897ORF11110P | |
| 11115 | helix-turn-helix domain-containing protein | |||
| 13285 | ribulose-phosphate 3-epimerase | |||
| 13290 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn9897DamP |
| 13295 | cell division protein DamX | |||
| 25525 | 3-5 exoribonuclease | |||
| 25530 | M | M.KpnSB1170ORF15910P (99% identity) | M.Kpn9897ORFBP | |
| 25535 | replication endonuclease | |||
| 27595 | 233 aa hypothetical protein | |||
| 27600 | M | M.Kgr211ORF20745P (98% identity) | M.Kpn9897ORFCP | |
| 27605 | holin | |||
| plasmid pINF102.4 | ||||
| 2060 | 100 aa hypothetical protein | |||
| 2065 | M | M.Sne174ORF28905P (95% identity) | M.Kpn9897ORFHP | |
| 2070 | ankyrin repeat domain-containing protein | |||
| plasmid pINF102.5 | ||||
| 425 | phosphate starvation-inducible protein PhoH | |||
| 430 | M | M.Kpn80232ORFDP (99% identity) | M.Kpn9897ORFGP | |
| 435 | 203 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6685 | SpnT protein | |||
| 6690 | M | M.SmaC1044ORF1801P (58% identity) | M.Kpn9897ORF6690AP | |
| 6695 | IS5-like element ISKpn26 family transposase | |||
| 6700 | M | M.SmaC1044ORF1801P (38% identity) | M.Kpn9897ORF6690BP | |
| 6705 | R | Kpn9897ORFIP (100% identity) | Kpn9897ORF6690P | |
| 6710 | shufflon system plasmid conjugative transfer | |||
| plasmid pINF102.4 | ||||
| 2030 | 125 aa hypothetical protein | |||
| 2035 | R | SmaKC004ORF50040P (98% identity) | CAGCAG | Kpn9897ORFEP |
| 2040 | M | M.Kpn109I (100% identity) | CAGCAG | M.Kpn9897ORFEP |
| 2045 | 94 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pINF102.6 | ||||
| 1315 | IS110 family transposase | |||
| 1320 | R | PgeFB2McrC2P (100% identity) | Kpn9897McrCP | |
| 1325 | R | KpnM9111McrBP (100% identity) | Kpn9897McrBP | |
| 1330 | IS3-like element ISKpn38 family transposase | |||