Escherichia coli 9A-3-9 |
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Putative Escherichia coli 9A-3-9 RM systems
Ref: Tansirichaiya,S. et al. unpublished
REBASE ref # 35539
| Sequence length: | GenBank #: | |
| Chromosome: | 4,613,946 bp | CP102708 |
| plasmid pE2899: | 108,470 bp | CP102707 |
REBASE acronym: Eco9A39
Org_num: 62903
All begin NV745_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1990 | adenine/cytosine-specific restriction | |||
| 1995 | R | Esp17TGCORF18925P (100% identity) | AACNNNNNNGTGC | Eco9A39ORF2000P |
| 2000 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco9A39ORF2000P |
| 2005 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco9A39ORF2000P |
| 2010 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6970 | cell division protein DamX | |||
| 6975 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9A39DamP |
| 6980 | ribulose-phosphate 3-epimerase | |||
| 7595 | DUF2556 family protein | |||
| 7600 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco9A39ORF7600P |
| 7605 | DNA-binding transcriptional regulator Fis | |||
| 14210 | phosphohydrolase | |||
| 14215 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco9A39DcmP |
| 14220 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco9A39DcmP |
| 14225 | drug/metabolite exporter YedA | |||
| 18180 | DUF1317 domain-containing protein | |||
| 18185 | M | M.SenHNK130ORF1185P (95% identity) | M.Eco9A39ORF18185P | |
| 18190 | DUF4060 family protein | |||
| plasmid pE2899 | ||||
| 170 | 73 aa hypothetical protein | |||
| 175 | M | M.Sfl60ORF25670P (100% identity) | SAY | M.Eco9A39ORF175P |
| 180 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1985 | GTPase | |||
| 1990 | R | SenHNK130MrrP (100% identity) | Eco9A39MrrP | |
| 1995 | type I restriction-modification system | |||
| 2010 | endoribonuclease SymE | |||
| 2015 | R | SenHNK130McrBP (100% identity) | Eco9A39McrBP | |
| 2020 | R | SenHNK130McrCP (100% identity) | Eco9A39McrCP | |
| 2025 | 978 aa hypothetical protein | |||