Escherichia coli 8R |
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Putative Escherichia coli 8R RM systems
Ref: Ma,T. et al. unpublished
REBASE ref # 35538
| Sequence length: | GenBank #: | |
| Chromosome: | 4,886,896 bp | CP110410 |
| plasmid p8R-2: | 94,988 bp | CP110412 |
| plasmid p8R-3: | 67,594 bp | CP110413 |
REBASE acronym: Eco8R
Org_num: 62900
All begin OM434_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3375 | 128 aa hypothetical protein | |||
| 3380 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.Eco8RORF3380P |
| 3385 | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.Eco8RORF3380P |
| 3390 | 428 aa hypothetical protein | |||
| 10520 | transposase domain-containing protein | |||
| 10525 | R | EcoEC31ORF3550P (100% identity) | CACNNNNNNTCC | Eco8RORF10535P |
| 10530 | S | S.EcoTHO010ORF28970P (100% identity) | CACNNNNNNTCC | S.Eco8RORF10535P |
| 10535 | M | M.EcoTHO010ORF28970P (100% identity) | CACNNNNNNTCC | M.Eco8RORF10535P |
| 10540 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3355 | HNH endonuclease | |||
| 3360 | R | EcosC41ORF5230P (100% identity) | Eco8RORF3360P | |
| 3365 | AAA family ATPase | |||
| 8830 | cell division protein DamX | |||
| 8835 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco8RDamP |
| 8840 | ribulose-phosphate 3-epimerase | |||
| 9385 | DUF2556 family protein | |||
| 9390 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco8RORF9390P |
| 9395 | DNA-binding transcriptional regulator Fis | |||
| 11340 | phospholipase D-like domain-containing protein | |||
| 11345 | M | M.PmiCZP44ORF11275P (100% identity) | M.Eco8RORF11345P | |
| 11350 | DUF3780 and DUF4357 domain-containing protein | |||
| 16240 | phosphohydrolase | |||
| 16245 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.Eco8RDcmP |
| 16250 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco8RDcmP |
| 16255 | drug/metabolite exporter YedA | |||
| plasmid p8R-2 | ||||
| 24900 | 73 aa hypothetical protein | |||
| 24905 | M | M.StyR64ORFAP (100% identity) | M.Eco8RORF24905P | |
| 24910 | 103 aa hypothetical protein | |||
| plasmid p8R-3 | ||||
| 24985 | 97 aa hypothetical protein | |||
| 24990 | M | M.Xca80ORFEP (100% identity) | M.Eco8RORF24990P | |
| 24995 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3360 | HNH endonuclease | |||
| 3365 | R | Eco3RMcrBP (100% identity) | Eco8RMcrBP | |
| 3370 | R | Ecows53McrCP (100% identity) | Eco8RMcrCP | |
| 3375 | 128 aa hypothetical protein | |||
| 11330 | transposase | |||
| 11335 | R | PmiCZP44MrrP (100% identity) | Eco8RMrrP | |
| 11340 | phospholipase D-like domain-containing protein | |||