Ralstonia species RS647 |
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Putative Ralstonia species RS647 RM systems
Ref: She,X. and He,Z. unpublished
REBASE ref # 26087
| Sequence length: | GenBank #: | |
| Chromosome: | 3,847,459 bp | CP086265 |
| plasmid megaplasmid: | 2,069,415 bp | CP086266 |
REBASE acronym: Rsp647
Org_num: 63151
All begin LGV81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17390 | sensor histidine kinase N-terminal | |||
| 17395 | R | RsoYC40ORF50P (100% identity) | Rsp647ORF17405P | |
| 17400 | 284 aa hypothetical protein | |||
| 17405 | M | M.RsoYC40ORF50P (100% identity) | M.Rsp647ORF17405P | |
| 17410 | Rrf2 family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 20 | M | M.RsoT78ORF20P (100% identity) | M.Rsp647ORF20P | |
| 25 | DUF87 domain-containing protein | |||
| 3865 | DUF6362 family protein | |||
| 3870 | M | M.RsoT78ORF1080P (98% identity) | M1.Rsp647ORF3870P | |
| 3875 | M | M1.Rso639ORF24980P (98% identity) | M2.Rsp647ORF3870P | |
| 3880 | NAD-glutamate dehydrogenase | |||
| 4010 | IS5 family transposase | |||
| 4015 | M | M.Rsp650ORF25870P (100% identity) | M.Rsp647ORF4015P | |
| 4020 | 48 aa hypothetical protein | |||
| 4650 | DUF6362 family protein | |||
| 4655 | M | M2.Rsp650ORF13700P (100% identity) | M1.Rsp647ORF4655P | |
| 4660 | M | M1.RsoT78ORF13280P (100% identity) | M2.Rsp647ORF4655P | |
| 4665 | DUF86 domain-containing protein | |||
| 4780 | H-NS histone family protein | |||
| 4785 | M | M.Rsp650ORF13560P (100% identity) | M.Rsp647ORF4785P | |
| 4790 | phospholipase D family protein | |||
| 14930 | 156 aa hypothetical protein | |||
| 14935 | RM | TinORF631P (64% identity) | Rsp647ORF14935P | |
| 14940 | IS3 family transposase | |||
| 16395 | tape measure protein | |||
| 16400 | M | M.Rsp650ORF25870P (100% identity) | M.Rsp647ORF16400P | |
| 16405 | type III secretion system YopJ family effector | |||
| 16515 | 121 aa hypothetical protein | |||
| 16520 | M | M2.RsoF501ORFLP (76% identity) | M1.Rsp647ORF16520P | |
| 16525 | M | M2.Rsp650ORF25990P (100% identity) | M2.Rsp647ORF16520P | |
| 16530 | 61 aa hypothetical protein | |||
| plasmid megaplasmid | ||||
| 23510 | IS5 family transposase | |||
| 23515 | M | M.Rso639ORF24670P (100% identity) | M.Rsp647ORF23515P | |
| 23525 | 120 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14240 | exonuclease domain-containing protein | |||
| 14245 | R | BpsAW44ORF11970P (98% identity) | Rsp647ORF14250P | |
| 14250 | M | M.Pae3796AORF24725P (82% identity) | M.Rsp647ORF14250P | |
| 14255 | ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17510 | PLP-dependent transferase | |||
| 17515 | R | RsoYC40MrrP (92% identity) | Rsp647MrrP | |
| 17520 | 85 aa hypothetical protein | |||