Ralstonia solanacearum RS639 |
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Putative Ralstonia solanacearum RS639 RM systems
Ref: She,X. and He,Z. unpublished
REBASE ref # 26087
| Sequence length: | GenBank #: | |
| Chromosome: | 3,858,011 bp | CP084738 |
| plasmid megaplasmid: | 2,083,023 bp | CP084739 |
REBASE acronym: Rso639
Org_num: 63147
All begin LG939_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3105 | Rrf2 family transcriptional regulator | |||
| 3110 | M | M.RsoF8ORF345P (99% identity) | M.Rso639ORF3110P | |
| ??? | R | Rso45F50ORFHP (100% identity) | Rso639ORF3110P | |
| 3125 | sensor histidine kinase N-terminal | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2365 | DUF87 domain-containing protein | |||
| 2370 | M | M.Rsp647ORF20P (100% identity) | M.Rso639ORF2370P | |
| 2375 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 3985 | 61 aa hypothetical protein | |||
| 3990 | M | M2.Rso238ORF700036P (96% identity) | M1.Rso639ORF3990P | |
| 3995 | M | M.RsoT78ORF1085P (71% identity) | M2.Rso639ORF3990P | |
| 4000 | type III secretion system effector protein | |||
| 4110 | IS5 family transposase | |||
| 4115 | M | M.RsoYQORF1280P (100% identity) | M.Rso639ORF4115P | |
| 4120 | tape measure protein | |||
| 10220 | tryptophan synthase subunit beta | |||
| 10225 | M | M.Rsp647ORF10140P (100% identity) | GTWWAC | M.Rso639ORF10225P |
| 10230 | tryptophan synthase subunit alpha | |||
| 11475 | site-specific integrase | |||
| 11480 | M | M.RsoT78ORF8715P (100% identity) | M.Rso639ORF11480P | |
| 11485 | 80 aa hypothetical protein | |||
| 16195 | type II toxin-antitoxin system VapC family | |||
| 16200 | M | M.RsoYQORF13165P (100% identity) | M.Rso639ORF16200P | |
| 16205 | 104 aa hypothetical protein | |||
| 16545 | tape measure protein | |||
| 16550 | M | M.RsoYQORF1280P (99% identity) | M.Rso639ORF16550P | |
| 16555 | IS5 family transposase | |||
| plasmid megaplasmid | ||||
| 24660 | 49 aa hypothetical protein | |||
| 24670 | M | M.Rsp647ORF23515P (100% identity) | M.Rso639ORF24670P | |
| 24675 | IS5 family transposase | |||
| 24975 | 121 aa hypothetical protein | |||
| 24980 | M | M2.RsoF8ORF1210P (99% identity) | M1.Rso639ORF24980P | |
| 24985 | M | M.Rso462ORFAP (90% identity) | M2.Rso639ORF24980P | |
| 24990 | DUF6362 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5640 | DUF4391 domain-containing protein | |||
| 5645 | M | M.Kqu436ORF22295P (84% identity) | M.Rso639ORF5645P | |
| 5650 | R | Rso462ORFNP (21% identity) | Rso639ORF5645AP | |
| 5655 | IS5 family transposase | |||
| 5660 | R | Rso462ORFNP (77% identity) | Rso639ORF5645BP | |
| 5665 | GIY-YIG nuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3005 | 85 aa hypothetical protein | |||
| 3010 | R | RsoYC40MrrP (92% identity) | Rso639MrrP | |
| 3015 | PLP-dependent transferase | |||