Ralstonia solanacearum RS638 |
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Putative Ralstonia solanacearum RS638 RM systems
Ref: She,X. and He,Z. unpublished
REBASE ref # 26087
| Sequence length: | GenBank #: | |
| Chromosome: | 3,840,767 bp | CP085043 |
| plasmid p1: | 2,061,231 bp | CP085044 |
REBASE acronym: Rso638
Org_num: 63146
All begin LH706_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 220 | Rrf2 family transcriptional regulator | |||
| 225 | M | M.Rsp650ORF235P (100% identity) | M.Rso638ORF225P | |
| ??? | R | Rsp650ORF235P (99% identity) | Rso638ORF225P | |
| 240 | sensor histidine kinase N-terminal | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1095 | 61 aa hypothetical protein | |||
| 1100 | M | M1.RsoRSNORF1245P (99% identity) | M1.Rso638ORF1100P | |
| 1105 | M | M1.RsosSY1ORF6610P (93% identity) | M2.Rso638ORF1100P | |
| 1110 | 121 aa hypothetical protein | |||
| 1440 | type II toxin-antitoxin system RelE/ParE family | |||
| 1445 | M | M1.Rsp650ORF1115P (100% identity) | M1.Rso638ORF1445P | |
| 1450 | M | M2.Rsp650ORF1115P (100% identity) | M2.Rso638ORF1445P | |
| 1455 | 121 aa hypothetical protein | |||
| 1570 | type III secretion system YopJ family effector | |||
| 1575 | M | M.Rsp650ORF25870P (100% identity) | M.Rso638ORF1575P | |
| 1580 | tape measure protein | |||
| 1720 | recombinase family protein | |||
| 1725 | R | Rsp650ORF1405P (100% identity) | AGGCCT | Rso638ORF1730P |
| 1730 | M | M.Rsp650ORF1405P (100% identity) | AGGCCT | M.Rso638ORF1730P |
| 1735 | type II toxin-antitoxin system RelB/DinJ family | |||
| 8045 | tryptophan synthase subunit beta | |||
| 8050 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.Rso638ORF8050P |
| 8055 | tryptophan synthase subunit alpha | |||
| 13550 | phospholipase D family protein | |||
| 13555 | M | M.Rsp650ORF13560P (100% identity) | M.Rso638ORF13555P | |
| 13560 | H-NS histone family protein | |||
| 13670 | DUF86 domain-containing protein | |||
| 13675 | M | M1.Rsp650ORF13700P (100% identity) | M1.Rso638ORF13675P | |
| 13680 | M | M2.Rsp650ORF13700P (100% identity) | M2.Rso638ORF13675P | |
| 13685 | DUF6362 family protein | |||
| plasmid p1 | ||||
| 19405 | tape measure protein | |||
| 19410 | M | M.Rsp650ORF25870P (100% identity) | M.Rso638ORF19410P | |
| 19415 | type III secretion system YopJ family effector | |||
| 19525 | 81 aa hypothetical protein | |||
| 19530 | M | M1.Rsp650ORF25990P (100% identity) | M1.Rso638ORF19530P | |
| 19535 | M | M2.Rsp650ORF25990P (100% identity) | M2.Rso638ORF19530P | |
| 19540 | DUF6362 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6605 | RNA polymerase sigma factor RpoD | |||
| 6615 | M | M.Rso161ORFGP (99% identity) | M.Rso638ORF6615P | |
| 6620 | R | Rso161ORFGP (97% identity) | Rso638ORF6615P | |
| 6625 | ankyrin repeat domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 120 | 45 aa hypothetical protein | |||
| 125 | R | Rsp650MrrP (100% identity) | Rso638MrrP | |
| 130 | PLP-dependent transferase | |||