Selenomonas sputigena KCOM 20461 |
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Putative Selenomonas sputigena KCOM 20461 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
Complete sequence: 2,740,586 bp
GenBank #: CP110231
REBASE acronym: Ssp20461
Org_num: 63183
All begin OL240_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2905 | ComEA family DNA-binding protein | |||
| 2915 | M | M.PmeBin187ORFGP (78% identity) | M.Ssp20461ORF2915P | |
| 2920 | S | S.BspGD8ORFFP (37% identity) | S.Ssp20461ORF2915P | |
| 2925 | R | Zfok32ORFFP (64% identity) | Ssp20461ORF2915P | |
| 2930 | aminopeptidase | |||
| 4450 | RsiV family protein | |||
| 4455 | R | Ssp35185ORF690P (98% identity) | Ssp20461ORF4475P | |
| 4460 | helix-turn-helix transcriptional regulator | |||
| 4465 | type II toxin-antitoxin system RelE/ParE family | |||
| 4470 | S | S2.AspGH6ORF4010P (31% identity) | S.Ssp20461ORF4475P | |
| 4475 | M | M.Ssp35185ORF690P (99% identity) | M.Ssp20461ORF4475P | |
| 4480 | recombinase family protein | |||
| 6715 | DUF262 domain-containing protein | |||
| 6720 | R | RspMGS15ORFDP (97% identity) | Ssp20461ORF6740P | |
| 6725 | S | S.Pde20019ORF3634P (43% identity) | S2.Ssp20461ORF6740P | |
| 6730 | tyrosine-type recombinase/integrase | |||
| 6735 | S | S2.Bsp2032II (43% identity) | S1.Ssp20461ORF6740P | |
| 6740 | M | M.RspMGS15ORFDP (99% identity) | M.Ssp20461ORF6740P | |
| 6745 | helix-turn-helix transcriptional regulator | |||
| 6890 | VOC family protein | |||
| 6895 | R | Ssp35185ORF2042P (96% identity) | Ssp20461ORF6895P | |
| 6900 | hemolysin family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4925 | 79 aa hypothetical protein | |||
| 4930 | M | M.Sov2ORF51030P (61% identity) | M.Ssp20461ORF4930P | |
| 4935 | DUF1492 domain-containing protein | |||
| 4940 | DUF4406 domain-containing protein | |||
| 4945 | M | M.Ssp591ORF5965P (88% identity) | M.Ssp20461ORF4945P | |
| 4950 | DEAD/DEAH box helicase | |||
| 9780 | 8-amino-7-oxononanoate synthase | |||
| 9785 | M | M.Ssp35185ORF127P (97% identity) | M1.Ssp20461ORF9785P | |
| 9790 | R | PmeBin721ORFAP (75% identity) | Ssp20461ORF9785P | |
| 9795 | M | M1.PmeBin721ORFAP (74% identity) | M2.Ssp20461ORF9785P | |
| 9800 | 133 aa hypothetical protein | |||
| 12395 | helicase-related protein | |||
| 12400 | M | M.DhaPCSSORF786P (55% identity) | M.Ssp20461ORF12400P | |
| 12405 | DUF499 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3240 | type II toxin-antitoxin system RelB/DinJ family | |||
| 3245 | R | TspTJ11ORFBP (75% identity) | Ssp20461ORF3250P | |
| 3250 | M | M.Ssp512ORF23090AP (64% identity) | M.Ssp20461ORF3250P | |
| 3255 | DUF4391 domain-containing protein | |||
| 5150 | radical SAM protein | |||
| 5155 | M | M.CscWT3DORFHP (90% identity) | M.Ssp20461ORF5155P | |
| 5160 | R | PmeBin475ORFCP (63% identity) | Ssp20461ORF5155P | |
| 5165 | IS3 family transposase | |||