Streptococcus suis ID34572 |
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Putative Streptococcus suis ID34572 RM systems
Ref: Kerdsin,A. et al. unpublished
REBASE ref # 35634
Complete sequence: 2,287,867 bp
GenBank #: CP109940
REBASE acronym: Ssu34572
Org_num: 63208
All begin OHM49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2725 | site-specific integrase | |||
| 2730 | S | S2.SsuWTORFDP (95% identity) | S4.Ssu34572ORF2755P | |
| 2735 | R | SsuYB51ORFAP (100% identity) | Ssu34572ORF2755P | |
| 2740 | S | S3.Ssu5ORF8195P (100% identity) | S3.Ssu34572ORF2755P | |
| 2745 | S | S2.SsuYB51ORFAP (100% identity) | S2.Ssu34572ORF2755P | |
| 2750 | S | S.SsuiS10ORFAP (39% identity) | S1.Ssu34572ORF2755P | |
| 2755 | M | M.SsuTANI1ORF1593P (100% identity) | M.Ssu34572ORF2755P | |
| 2760 | serine--tRNA ligase | |||
| 4350 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 4355 | R | SsuTRG6ORF4410P (100% identity) | Ssu34572ORF4360P | |
| 4360 | M | M.SsuTRG6ORF4410P (100% identity) | M.Ssu34572ORF4360P | |
| 4365 | S | S1.Ssu160853bORF1431P (100% identity) | S1.Ssu34572ORF4360P | |
| 4370 | S | S3.Ssu105ORF3865P (99% identity) | S2.Ssu34572ORF4360P | |
| 4375 | ribose-5-phosphate isomerase RpiA | |||
| 8760 | AAA family ATPase | |||
| ??? | S | S.SsuTRG6ORF8820P (100% identity) | S.Ssu34572ORF8775P | |
| 8775 | M | M.SsuTRG6ORF8820P (100% identity) | M.Ssu34572ORF8775P | |
| 8780 | R | SsuTRG6ORF8820P (99% identity) | Ssu34572ORF8775P | |
| 8785 | FAD-containing oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 250 | bifunctional | |||
| 255 | M | M1.SsuYB51ORFBP (100% identity) | GATC | M1.Ssu34572ORF255P |
| 260 | M | M2.SsuYB51ORFBP (100% identity) | GATC | M2.Ssu34572ORF255P |
| 265 | R | R1.SsuYB51ORFBP (100% identity) | GATC | R1.Ssu34572ORF255P |
| 270 | R | R2.SsuYB51ORFBP (100% identity) | GATC | R2.Ssu34572ORF255P |
| 275 | phosphoribosylamine--glycine ligase | |||
| 5120 | 142 aa hypothetical protein | |||
| 5125 | M | M.SsuTRG6ORF9505P (100% identity) | M.Ssu34572ORF5125P | |
| 5130 | replication initiator protein A | |||
| 5360 | 150 aa hypothetical protein | |||
| 5365 | M | M.SsuGX69ORF3500P (100% identity) | M.Ssu34572ORF5365P | |
| 5370 | DNA (cytosine-5-)-methyltransferase | |||
| 5365 | DNA (cytosine-5-)-methyltransferase | |||
| 5370 | M | M.SsuTRG6ORF5430P (100% identity) | M.Ssu34572ORF5370P | |
| 5375 | 74 aa hypothetical protein | |||
| 9455 | 142 aa hypothetical protein | |||
| 9460 | M | M.SsuTRG6ORF9505P (99% identity) | M.Ssu34572ORF9460P | |
| 9465 | replication initiator protein A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8820 | IS200/IS605 family transposase | |||
| 8825 | R | SsuTRG6ORF8875P (100% identity) | Ssu34572ORF8830P | |
| 8830 | M | M.SsuT15ORF6640P (100% identity) | M.Ssu34572ORF8830P | |
| 8835 | DUF3885 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4715 | 262 aa hypothetical protein | |||
| 4720 | R | SsuTRG6McrBP (100% identity) | Ssu34572McrBP | |
| 4725 | R | SsuTRG6McrCP (100% identity) | Ssu34572McrCP | |
| 4730 | glutamine-hydrolyzing GMP synthase | |||