Bacteroides thetaiotaomicron VPI-2808B |
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Putative Bacteroides thetaiotaomicron VPI-2808B RM systems
Ref: Campbell,D.E. et al. unpublished
REBASE ref # 35521
Complete sequence: 6,225,667 bp
GenBank #: CP083687
REBASE acronym: Bth28088
Org_num: 62828
All begin KQP69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1820 | site-specific integrase | |||
| 1825 | S | S1.Bov926ORF5895P (89% identity) | S4.Bth28088ORF1850P | |
| 1830 | S | S2.PdiC09ORF553P (100% identity) | S3.Bth28088ORF1850P | |
| 1835 | S | S2.Bfr640ORF9195P (100% identity) | S2.Bth28088ORF1850P | |
| 1840 | S | S2.Pin17ORF406P (67% identity) | S1.Bth28088ORF1850P | |
| 1845 | virulence RhuM family protein | |||
| 1850 | M | M.Bov926ORF5895P (100% identity) | M.Bth28088ORF1850P | |
| 1855 | DUF262 domain-containing HNH endonuclease family | |||
| 1860 | R | Bov926ORF5895P (100% identity) | Bth28088ORF1850P | |
| 1865 | helix-turn-helix transcriptional regulator | |||
| 1900 | helix-turn-helix domain-containing protein | |||
| ??? | S | S.UbaFSORFKP (35% identity) | S3.Bth28088ORF1920P | |
| 1905 | tyrosine-type recombinase/integrase | |||
| 1910 | S | S2.Bth446ORF12230P (63% identity) | S2.Bth28088ORF1920P | |
| 1915 | S | S1.Bth935ORF18135P (100% identity) | S1.Bth28088ORF1920P | |
| 1920 | M | M.Bth935ORF18135P (100% identity) | M.Bth28088ORF1920P | |
| 1925 | R | Bth7853ORF13975P (100% identity) | Bth28088ORF1920P | |
| 1930 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 370 | helix-turn-helix domain containing protein | |||
| 375 | M | M.PmeBin3ORFCP (100% identity) | M.Bth28088ORF375P | |
| 380 | 315 aa hypothetical protein | |||
| 435 | 315 aa hypothetical protein | |||
| 440 | M | M.Bxy319ORF11975P (100% identity) | M.Bth28088ORF440P | |
| 445 | helix-turn-helix domain containing protein | |||
| 5320 | 235 aa hypothetical protein | |||
| 5325 | C | C.BthBFG55ORF11565P (100% identity) | C.Bth28088ORF5330P | |
| 5330 | M | M.BthBFG55ORF11565P (100% identity) | M.Bth28088ORF5330P | |
| 5335 | ATP-binding protein | |||
| 5340 | R | Bth8713ORF5310P (100% identity) | Bth28088ORF5330P | |
| 5345 | PD-(D/E)XK motif protein | |||
| 5350 | AIPR family protein | |||
| 5355 | V | V.Bth8713ORF5310P (100% identity) | V.Bth28088ORF5330P | |
| 5360 | 217 aa hypothetical protein | |||
| 5610 | 55 aa hypothetical protein | |||
| 5615 | RM | Msa17ORFE1P (97% identity) | Bth28088ORF5615P | |
| 5620 | transposase | |||